Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hdhd3Q9CYW4 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hdhd3Q9CYW4 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.21□□□□□ -0.45
Hdhd3Q9CYW4 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC12.21□□□□□ -0.45
Hdhd3Q9CYW4 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.21□□□□□ -0.45
Hdhd3Q9CYW4 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hdhd3Q9CYW4 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Hdhd3Q9CYW4 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hdhd3Q9CYW4 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hdhd3Q9CYW4 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Hdhd3Q9CYW4 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hdhd3Q9CYW4 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hdhd3Q9CYW4 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hdhd3Q9CYW4 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hdhd3Q9CYW4 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hdhd3Q9CYW4 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hdhd3Q9CYW4 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.46
Hdhd3Q9CYW4 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hdhd3Q9CYW4 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Hdhd3Q9CYW4 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hdhd3Q9CYW4 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hdhd3Q9CYW4 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hdhd3Q9CYW4 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hdhd3Q9CYW4 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hdhd3Q9CYW4 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hdhd3Q9CYW4 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hdhd3Q9CYW4 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Hdhd3Q9CYW4 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hdhd3Q9CYW4 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hdhd3Q9CYW4 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Hdhd3Q9CYW4 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hdhd3Q9CYW4 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hdhd3Q9CYW4 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.2□□□□□ -0.46
Hdhd3Q9CYW4 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hdhd3Q9CYW4 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hdhd3Q9CYW4 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hdhd3Q9CYW4 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hdhd3Q9CYW4 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.2□□□□□ -0.46
Hdhd3Q9CYW4 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hdhd3Q9CYW4 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.2□□□□□ -0.46
Hdhd3Q9CYW4 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hdhd3Q9CYW4 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.2□□□□□ -0.46
Hdhd3Q9CYW4 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC12.2□□□□□ -0.46
Hdhd3Q9CYW4 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Hdhd3Q9CYW4 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.2□□□□□ -0.46
Hdhd3Q9CYW4 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.2□□□□□ -0.46
Hdhd3Q9CYW4 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.2□□□□□ -0.46
Hdhd3Q9CYW4 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hdhd3Q9CYW4 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hdhd3Q9CYW4 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hdhd3Q9CYW4 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.2□□□□□ -0.46
Hdhd3Q9CYW4 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.2□□□□□ -0.46
Hdhd3Q9CYW4 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hdhd3Q9CYW4 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Hdhd3Q9CYW4 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Hdhd3Q9CYW4 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hdhd3Q9CYW4 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hdhd3Q9CYW4 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hdhd3Q9CYW4 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Hdhd3Q9CYW4 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hdhd3Q9CYW4 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Hdhd3Q9CYW4 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hdhd3Q9CYW4 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hdhd3Q9CYW4 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Hdhd3Q9CYW4 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hdhd3Q9CYW4 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.19□□□□□ -0.46
Hdhd3Q9CYW4 Gm15039-201ENSMUST00000118914 875 ntBASIC12.19□□□□□ -0.46
Hdhd3Q9CYW4 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Hdhd3Q9CYW4 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hdhd3Q9CYW4 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hdhd3Q9CYW4 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Hdhd3Q9CYW4 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Hdhd3Q9CYW4 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.19□□□□□ -0.46
Hdhd3Q9CYW4 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hdhd3Q9CYW4 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hdhd3Q9CYW4 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hdhd3Q9CYW4 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hdhd3Q9CYW4 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hdhd3Q9CYW4 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hdhd3Q9CYW4 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hdhd3Q9CYW4 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hdhd3Q9CYW4 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hdhd3Q9CYW4 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hdhd3Q9CYW4 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hdhd3Q9CYW4 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hdhd3Q9CYW4 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hdhd3Q9CYW4 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hdhd3Q9CYW4 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Hdhd3Q9CYW4 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Hdhd3Q9CYW4 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hdhd3Q9CYW4 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Hdhd3Q9CYW4 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hdhd3Q9CYW4 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hdhd3Q9CYW4 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Hdhd3Q9CYW4 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.18□□□□□ -0.46
Hdhd3Q9CYW4 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hdhd3Q9CYW4 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.18□□□□□ -0.46
Hdhd3Q9CYW4 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hdhd3Q9CYW4 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hdhd3Q9CYW4 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms