Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trim13Q9CYB0 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim13Q9CYB0 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim13Q9CYB0 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim13Q9CYB0 Gm12134-201ENSMUST00000122109 520 ntBASIC13.87□□□□□ -0.19
Trim13Q9CYB0 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim13Q9CYB0 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim13Q9CYB0 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC13.87□□□□□ -0.19
Trim13Q9CYB0 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Trim13Q9CYB0 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim13Q9CYB0 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC13.87□□□□□ -0.19
Trim13Q9CYB0 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim13Q9CYB0 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim13Q9CYB0 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim13Q9CYB0 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim13Q9CYB0 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim13Q9CYB0 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.87□□□□□ -0.19
Trim13Q9CYB0 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim13Q9CYB0 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim13Q9CYB0 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim13Q9CYB0 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trim13Q9CYB0 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
Trim13Q9CYB0 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim13Q9CYB0 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trim13Q9CYB0 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim13Q9CYB0 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Trim13Q9CYB0 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Trim13Q9CYB0 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim13Q9CYB0 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim13Q9CYB0 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim13Q9CYB0 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim13Q9CYB0 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim13Q9CYB0 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trim13Q9CYB0 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim13Q9CYB0 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim13Q9CYB0 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Trim13Q9CYB0 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.86□□□□□ -0.19
Trim13Q9CYB0 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trim13Q9CYB0 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim13Q9CYB0 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim13Q9CYB0 Gm13312-201ENSMUST00000119631 718 ntBASIC13.86□□□□□ -0.19
Trim13Q9CYB0 Gm23634-201ENSMUST00000175071 91 ntBASIC13.86□□□□□ -0.19
Trim13Q9CYB0 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim13Q9CYB0 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim13Q9CYB0 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Trim13Q9CYB0 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim13Q9CYB0 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Trim13Q9CYB0 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim13Q9CYB0 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim13Q9CYB0 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim13Q9CYB0 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim13Q9CYB0 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim13Q9CYB0 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim13Q9CYB0 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.85□□□□□ -0.19
Trim13Q9CYB0 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim13Q9CYB0 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim13Q9CYB0 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.85□□□□□ -0.19
Trim13Q9CYB0 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim13Q9CYB0 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Trim13Q9CYB0 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim13Q9CYB0 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim13Q9CYB0 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim13Q9CYB0 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim13Q9CYB0 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim13Q9CYB0 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim13Q9CYB0 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim13Q9CYB0 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim13Q9CYB0 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim13Q9CYB0 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim13Q9CYB0 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim13Q9CYB0 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC13.85□□□□□ -0.19
Trim13Q9CYB0 Gm5587-201ENSMUST00000206270 674 ntBASIC13.85□□□□□ -0.19
Trim13Q9CYB0 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Trim13Q9CYB0 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim13Q9CYB0 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim13Q9CYB0 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trim13Q9CYB0 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim13Q9CYB0 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim13Q9CYB0 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
Trim13Q9CYB0 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.85□□□□□ -0.19
Trim13Q9CYB0 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.85□□□□□ -0.19
Trim13Q9CYB0 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim13Q9CYB0 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim13Q9CYB0 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim13Q9CYB0 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim13Q9CYB0 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim13Q9CYB0 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim13Q9CYB0 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim13Q9CYB0 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim13Q9CYB0 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trim13Q9CYB0 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim13Q9CYB0 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trim13Q9CYB0 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.84□□□□□ -0.19
Trim13Q9CYB0 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim13Q9CYB0 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim13Q9CYB0 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim13Q9CYB0 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim13Q9CYB0 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim13Q9CYB0 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Trim13Q9CYB0 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms