Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ssu72Q9CY97 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ssu72Q9CY97 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Ssu72Q9CY97 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssu72Q9CY97 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssu72Q9CY97 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ssu72Q9CY97 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Ssu72Q9CY97 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssu72Q9CY97 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssu72Q9CY97 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssu72Q9CY97 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.87□□□□□ -0.03
Ssu72Q9CY97 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssu72Q9CY97 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssu72Q9CY97 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssu72Q9CY97 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssu72Q9CY97 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Ssu72Q9CY97 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssu72Q9CY97 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssu72Q9CY97 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssu72Q9CY97 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssu72Q9CY97 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Ssu72Q9CY97 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssu72Q9CY97 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ssu72Q9CY97 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Ssu72Q9CY97 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ssu72Q9CY97 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ssu72Q9CY97 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ssu72Q9CY97 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ssu72Q9CY97 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ssu72Q9CY97 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ssu72Q9CY97 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ssu72Q9CY97 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ssu72Q9CY97 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ssu72Q9CY97 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ssu72Q9CY97 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ssu72Q9CY97 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Ssu72Q9CY97 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ssu72Q9CY97 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.86□□□□□ -0.03
Ssu72Q9CY97 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ssu72Q9CY97 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ssu72Q9CY97 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ssu72Q9CY97 Gm27742-201ENSMUST00000184667 60 ntBASIC14.86□□□□□ -0.03
Ssu72Q9CY97 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ssu72Q9CY97 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Ssu72Q9CY97 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ssu72Q9CY97 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ssu72Q9CY97 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ssu72Q9CY97 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ssu72Q9CY97 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ssu72Q9CY97 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ssu72Q9CY97 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ssu72Q9CY97 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ssu72Q9CY97 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ssu72Q9CY97 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ssu72Q9CY97 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ssu72Q9CY97 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ssu72Q9CY97 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ssu72Q9CY97 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssu72Q9CY97 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssu72Q9CY97 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ssu72Q9CY97 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Ssu72Q9CY97 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Ssu72Q9CY97 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssu72Q9CY97 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ssu72Q9CY97 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssu72Q9CY97 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssu72Q9CY97 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssu72Q9CY97 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssu72Q9CY97 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssu72Q9CY97 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.85□□□□□ -0.03
Ssu72Q9CY97 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssu72Q9CY97 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssu72Q9CY97 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssu72Q9CY97 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.85□□□□□ -0.03
Ssu72Q9CY97 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Ssu72Q9CY97 Gm15372-201ENSMUST00000120729 834 ntBASIC14.85□□□□□ -0.03
Ssu72Q9CY97 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssu72Q9CY97 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Ssu72Q9CY97 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.85□□□□□ -0.03
Ssu72Q9CY97 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssu72Q9CY97 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.85□□□□□ -0.03
Ssu72Q9CY97 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssu72Q9CY97 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssu72Q9CY97 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssu72Q9CY97 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.85□□□□□ -0.03
Ssu72Q9CY97 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssu72Q9CY97 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ssu72Q9CY97 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ssu72Q9CY97 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.85□□□□□ -0.03
Ssu72Q9CY97 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ssu72Q9CY97 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssu72Q9CY97 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ssu72Q9CY97 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssu72Q9CY97 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ssu72Q9CY97 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ssu72Q9CY97 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssu72Q9CY97 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssu72Q9CY97 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssu72Q9CY97 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssu72Q9CY97 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms