Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Nip7Q9CXK8 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Nip7Q9CXK8 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nip7Q9CXK8 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nip7Q9CXK8 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nip7Q9CXK8 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nip7Q9CXK8 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nip7Q9CXK8 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nip7Q9CXK8 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Nip7Q9CXK8 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC18.55■□□□□ 0.56
Nip7Q9CXK8 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nip7Q9CXK8 Gm5320-201ENSMUST00000207163 1519 ntBASIC18.55■□□□□ 0.56
Nip7Q9CXK8 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Nip7Q9CXK8 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nip7Q9CXK8 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nip7Q9CXK8 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nip7Q9CXK8 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
Nip7Q9CXK8 Gm4204-201ENSMUST00000110798 1231 ntBASIC18.55■□□□□ 0.56
Nip7Q9CXK8 Gm15321-201ENSMUST00000121290 288 ntBASIC18.55■□□□□ 0.56
Nip7Q9CXK8 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC18.55■□□□□ 0.56
Nip7Q9CXK8 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nip7Q9CXK8 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Nip7Q9CXK8 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nip7Q9CXK8 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC18.55■□□□□ 0.56
Nip7Q9CXK8 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nip7Q9CXK8 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC18.55■□□□□ 0.56
Nip7Q9CXK8 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nip7Q9CXK8 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nip7Q9CXK8 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Nip7Q9CXK8 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nip7Q9CXK8 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nip7Q9CXK8 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nip7Q9CXK8 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nip7Q9CXK8 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nip7Q9CXK8 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nip7Q9CXK8 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nip7Q9CXK8 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nip7Q9CXK8 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nip7Q9CXK8 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nip7Q9CXK8 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nip7Q9CXK8 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC18.54■□□□□ 0.56
Nip7Q9CXK8 Mir1897-201ENSMUST00000122581 272 ntBASIC18.54■□□□□ 0.56
Nip7Q9CXK8 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nip7Q9CXK8 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nip7Q9CXK8 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nip7Q9CXK8 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nip7Q9CXK8 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nip7Q9CXK8 Gm43438-201ENSMUST00000198133 379 ntBASIC18.54■□□□□ 0.56
Nip7Q9CXK8 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nip7Q9CXK8 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Nip7Q9CXK8 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nip7Q9CXK8 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nip7Q9CXK8 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Nip7Q9CXK8 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nip7Q9CXK8 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nip7Q9CXK8 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.54■□□□□ 0.56
Nip7Q9CXK8 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nip7Q9CXK8 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nip7Q9CXK8 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Nip7Q9CXK8 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nip7Q9CXK8 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nip7Q9CXK8 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nip7Q9CXK8 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nip7Q9CXK8 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nip7Q9CXK8 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
Nip7Q9CXK8 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC18.53■□□□□ 0.56
Nip7Q9CXK8 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC18.53■□□□□ 0.56
Nip7Q9CXK8 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nip7Q9CXK8 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nip7Q9CXK8 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nip7Q9CXK8 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC18.53■□□□□ 0.56
Nip7Q9CXK8 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nip7Q9CXK8 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nip7Q9CXK8 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nip7Q9CXK8 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nip7Q9CXK8 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nip7Q9CXK8 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nip7Q9CXK8 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Nip7Q9CXK8 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nip7Q9CXK8 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nip7Q9CXK8 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nip7Q9CXK8 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC18.52■□□□□ 0.56
Nip7Q9CXK8 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nip7Q9CXK8 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nip7Q9CXK8 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Nip7Q9CXK8 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Nip7Q9CXK8 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nip7Q9CXK8 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Nip7Q9CXK8 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nip7Q9CXK8 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC18.52■□□□□ 0.56
Nip7Q9CXK8 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Nip7Q9CXK8 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC18.52■□□□□ 0.56
Nip7Q9CXK8 Gm24694-201ENSMUST00000180054 110 ntBASIC18.52■□□□□ 0.56
Nip7Q9CXK8 Gm27663-201ENSMUST00000184839 110 ntBASIC18.52■□□□□ 0.56
Nip7Q9CXK8 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC18.52■□□□□ 0.56
Nip7Q9CXK8 Gm7653-201ENSMUST00000214567 508 ntBASIC18.52■□□□□ 0.56
Nip7Q9CXK8 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Nip7Q9CXK8 Hist1h2al-201ENSMUST00000091708 339 ntBASIC18.52■□□□□ 0.56
Nip7Q9CXK8 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Nip7Q9CXK8 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms