Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Otud1Q9CUB6 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Otud1Q9CUB6 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Otud1Q9CUB6 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Otud1Q9CUB6 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Otud1Q9CUB6 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Otud1Q9CUB6 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Otud1Q9CUB6 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Otud1Q9CUB6 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Otud1Q9CUB6 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Otud1Q9CUB6 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.15□□□□□ -0.14
Otud1Q9CUB6 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Otud1Q9CUB6 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Otud1Q9CUB6 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Otud1Q9CUB6 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Otud1Q9CUB6 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Otud1Q9CUB6 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Otud1Q9CUB6 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Otud1Q9CUB6 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Otud1Q9CUB6 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.15□□□□□ -0.14
Otud1Q9CUB6 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.15□□□□□ -0.14
Otud1Q9CUB6 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.15□□□□□ -0.14
Otud1Q9CUB6 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Otud1Q9CUB6 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Otud1Q9CUB6 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Otud1Q9CUB6 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Otud1Q9CUB6 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Otud1Q9CUB6 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Otud1Q9CUB6 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Otud1Q9CUB6 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Otud1Q9CUB6 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Otud1Q9CUB6 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Otud1Q9CUB6 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Otud1Q9CUB6 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Otud1Q9CUB6 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Otud1Q9CUB6 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Otud1Q9CUB6 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Otud1Q9CUB6 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Otud1Q9CUB6 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Otud1Q9CUB6 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Otud1Q9CUB6 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Otud1Q9CUB6 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.15
Otud1Q9CUB6 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
Otud1Q9CUB6 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Otud1Q9CUB6 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Otud1Q9CUB6 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Otud1Q9CUB6 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC14.14□□□□□ -0.15
Otud1Q9CUB6 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Otud1Q9CUB6 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Otud1Q9CUB6 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Otud1Q9CUB6 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Otud1Q9CUB6 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Otud1Q9CUB6 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Otud1Q9CUB6 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Otud1Q9CUB6 Mir1895-201ENSMUST00000122615 79 ntBASIC14.14□□□□□ -0.15
Otud1Q9CUB6 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Otud1Q9CUB6 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Otud1Q9CUB6 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.14□□□□□ -0.15
Otud1Q9CUB6 Gm44335-201ENSMUST00000196879 141 ntBASIC14.14□□□□□ -0.15
Otud1Q9CUB6 Gm44297-201ENSMUST00000198304 141 ntBASIC14.14□□□□□ -0.15
Otud1Q9CUB6 Gm44346-201ENSMUST00000198851 141 ntBASIC14.14□□□□□ -0.15
Otud1Q9CUB6 Gm43767-201ENSMUST00000198933 381 ntBASIC14.14□□□□□ -0.15
Otud1Q9CUB6 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.14□□□□□ -0.15
Otud1Q9CUB6 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.14□□□□□ -0.15
Otud1Q9CUB6 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Otud1Q9CUB6 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.14□□□□□ -0.15
Otud1Q9CUB6 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Otud1Q9CUB6 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Otud1Q9CUB6 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Otud1Q9CUB6 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.14□□□□□ -0.15
Otud1Q9CUB6 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Otud1Q9CUB6 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Otud1Q9CUB6 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Otud1Q9CUB6 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Otud1Q9CUB6 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Otud1Q9CUB6 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Otud1Q9CUB6 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Otud1Q9CUB6 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Otud1Q9CUB6 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Otud1Q9CUB6 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.14□□□□□ -0.15
Otud1Q9CUB6 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.13□□□□□ -0.15
Otud1Q9CUB6 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Otud1Q9CUB6 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Otud1Q9CUB6 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Otud1Q9CUB6 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Otud1Q9CUB6 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.13□□□□□ -0.15
Otud1Q9CUB6 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Otud1Q9CUB6 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Otud1Q9CUB6 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Otud1Q9CUB6 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Otud1Q9CUB6 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Otud1Q9CUB6 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Otud1Q9CUB6 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Otud1Q9CUB6 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.13□□□□□ -0.15
Otud1Q9CUB6 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.13□□□□□ -0.15
Otud1Q9CUB6 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Otud1Q9CUB6 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.13□□□□□ -0.15
Otud1Q9CUB6 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.13□□□□□ -0.15
Otud1Q9CUB6 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.13□□□□□ -0.15
Otud1Q9CUB6 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms