Protein–RNA interactions for Protein: Q9CQE1

Nipsnap3b, Protein NipSnap homolog 3B, mousemouse

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipsnap3bQ9CQE1 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.79□□□□□ -0.04
Nipsnap3bQ9CQE1 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.79□□□□□ -0.04
Nipsnap3bQ9CQE1 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nipsnap3bQ9CQE1 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nipsnap3bQ9CQE1 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nipsnap3bQ9CQE1 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.79□□□□□ -0.04
Nipsnap3bQ9CQE1 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.79□□□□□ -0.04
Nipsnap3bQ9CQE1 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nipsnap3bQ9CQE1 Gm10499-201ENSMUST00000174094 934 ntBASIC14.79□□□□□ -0.04
Nipsnap3bQ9CQE1 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nipsnap3bQ9CQE1 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Nipsnap3bQ9CQE1 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nipsnap3bQ9CQE1 Gm6296-201ENSMUST00000222599 943 ntBASIC14.79□□□□□ -0.04
Nipsnap3bQ9CQE1 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nipsnap3bQ9CQE1 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nipsnap3bQ9CQE1 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nipsnap3bQ9CQE1 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nipsnap3bQ9CQE1 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nipsnap3bQ9CQE1 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nipsnap3bQ9CQE1 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nipsnap3bQ9CQE1 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Nipsnap3bQ9CQE1 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.79□□□□□ -0.04
Nipsnap3bQ9CQE1 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nipsnap3bQ9CQE1 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nipsnap3bQ9CQE1 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Nipsnap3bQ9CQE1 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Nipsnap3bQ9CQE1 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.79□□□□□ -0.04
Nipsnap3bQ9CQE1 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nipsnap3bQ9CQE1 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nipsnap3bQ9CQE1 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nipsnap3bQ9CQE1 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Nipsnap3bQ9CQE1 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.78□□□□□ -0.04
Nipsnap3bQ9CQE1 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nipsnap3bQ9CQE1 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nipsnap3bQ9CQE1 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nipsnap3bQ9CQE1 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nipsnap3bQ9CQE1 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nipsnap3bQ9CQE1 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nipsnap3bQ9CQE1 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.78□□□□□ -0.04
Nipsnap3bQ9CQE1 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nipsnap3bQ9CQE1 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nipsnap3bQ9CQE1 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nipsnap3bQ9CQE1 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nipsnap3bQ9CQE1 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nipsnap3bQ9CQE1 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.78□□□□□ -0.04
Nipsnap3bQ9CQE1 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Nipsnap3bQ9CQE1 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nipsnap3bQ9CQE1 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.78□□□□□ -0.04
Nipsnap3bQ9CQE1 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.78□□□□□ -0.04
Nipsnap3bQ9CQE1 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.78□□□□□ -0.04
Nipsnap3bQ9CQE1 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nipsnap3bQ9CQE1 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.78□□□□□ -0.04
Nipsnap3bQ9CQE1 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nipsnap3bQ9CQE1 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nipsnap3bQ9CQE1 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nipsnap3bQ9CQE1 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nipsnap3bQ9CQE1 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.78□□□□□ -0.04
Nipsnap3bQ9CQE1 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nipsnap3bQ9CQE1 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nipsnap3bQ9CQE1 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Nipsnap3bQ9CQE1 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.77□□□□□ -0.04
Nipsnap3bQ9CQE1 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nipsnap3bQ9CQE1 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Nipsnap3bQ9CQE1 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Nipsnap3bQ9CQE1 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Nipsnap3bQ9CQE1 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nipsnap3bQ9CQE1 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nipsnap3bQ9CQE1 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Nipsnap3bQ9CQE1 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nipsnap3bQ9CQE1 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
Nipsnap3bQ9CQE1 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Nipsnap3bQ9CQE1 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nipsnap3bQ9CQE1 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nipsnap3bQ9CQE1 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Nipsnap3bQ9CQE1 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nipsnap3bQ9CQE1 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.77□□□□□ -0.05
Nipsnap3bQ9CQE1 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nipsnap3bQ9CQE1 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nipsnap3bQ9CQE1 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nipsnap3bQ9CQE1 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nipsnap3bQ9CQE1 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nipsnap3bQ9CQE1 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nipsnap3bQ9CQE1 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nipsnap3bQ9CQE1 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nipsnap3bQ9CQE1 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Nipsnap3bQ9CQE1 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nipsnap3bQ9CQE1 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nipsnap3bQ9CQE1 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nipsnap3bQ9CQE1 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nipsnap3bQ9CQE1 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nipsnap3bQ9CQE1 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nipsnap3bQ9CQE1 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nipsnap3bQ9CQE1 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nipsnap3bQ9CQE1 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nipsnap3bQ9CQE1 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nipsnap3bQ9CQE1 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Nipsnap3bQ9CQE1 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nipsnap3bQ9CQE1 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nipsnap3bQ9CQE1 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Nipsnap3bQ9CQE1 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms