Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chchd1Q9CQA6 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.33□□□□□ -0.6
Chchd1Q9CQA6 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chchd1Q9CQA6 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Chchd1Q9CQA6 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chchd1Q9CQA6 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chchd1Q9CQA6 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chchd1Q9CQA6 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chchd1Q9CQA6 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chchd1Q9CQA6 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC11.33□□□□□ -0.6
Chchd1Q9CQA6 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC11.33□□□□□ -0.6
Chchd1Q9CQA6 Gm26524-201ENSMUST00000192339 390 ntBASIC11.33□□□□□ -0.6
Chchd1Q9CQA6 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC11.33□□□□□ -0.6
Chchd1Q9CQA6 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chchd1Q9CQA6 Gm4968-201ENSMUST00000071458 858 ntBASIC11.33□□□□□ -0.6
Chchd1Q9CQA6 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chchd1Q9CQA6 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chchd1Q9CQA6 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chchd1Q9CQA6 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.33□□□□□ -0.6
Chchd1Q9CQA6 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chchd1Q9CQA6 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.33□□□□□ -0.6
Chchd1Q9CQA6 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chchd1Q9CQA6 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chchd1Q9CQA6 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chchd1Q9CQA6 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chchd1Q9CQA6 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chchd1Q9CQA6 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chchd1Q9CQA6 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chchd1Q9CQA6 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chchd1Q9CQA6 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chchd1Q9CQA6 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chchd1Q9CQA6 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chchd1Q9CQA6 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chchd1Q9CQA6 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chchd1Q9CQA6 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chchd1Q9CQA6 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Chchd1Q9CQA6 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chchd1Q9CQA6 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Chchd1Q9CQA6 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Chchd1Q9CQA6 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC11.32□□□□□ -0.6
Chchd1Q9CQA6 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Chchd1Q9CQA6 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Chchd1Q9CQA6 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chchd1Q9CQA6 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chchd1Q9CQA6 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC11.32□□□□□ -0.6
Chchd1Q9CQA6 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chchd1Q9CQA6 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Chchd1Q9CQA6 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Chchd1Q9CQA6 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chchd1Q9CQA6 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC11.32□□□□□ -0.6
Chchd1Q9CQA6 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chchd1Q9CQA6 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.32□□□□□ -0.6
Chchd1Q9CQA6 Gm7638-201ENSMUST00000121348 967 ntBASIC11.32□□□□□ -0.6
Chchd1Q9CQA6 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Chchd1Q9CQA6 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC11.32□□□□□ -0.6
Chchd1Q9CQA6 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Chchd1Q9CQA6 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chchd1Q9CQA6 Rab3c-203ENSMUST00000224180 967 ntBASIC11.32□□□□□ -0.6
Chchd1Q9CQA6 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Chchd1Q9CQA6 Gm13241-201ENSMUST00000094493 780 ntBASIC11.32□□□□□ -0.6
Chchd1Q9CQA6 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chchd1Q9CQA6 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chchd1Q9CQA6 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Chchd1Q9CQA6 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chchd1Q9CQA6 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chchd1Q9CQA6 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Chchd1Q9CQA6 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chchd1Q9CQA6 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Chchd1Q9CQA6 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chchd1Q9CQA6 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chchd1Q9CQA6 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.32□□□□□ -0.6
Chchd1Q9CQA6 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Chchd1Q9CQA6 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chchd1Q9CQA6 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chchd1Q9CQA6 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chchd1Q9CQA6 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chchd1Q9CQA6 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chchd1Q9CQA6 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chchd1Q9CQA6 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chchd1Q9CQA6 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chchd1Q9CQA6 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Chchd1Q9CQA6 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chchd1Q9CQA6 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chchd1Q9CQA6 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Chchd1Q9CQA6 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Chchd1Q9CQA6 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Chchd1Q9CQA6 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chchd1Q9CQA6 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Chchd1Q9CQA6 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chchd1Q9CQA6 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Chchd1Q9CQA6 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC11.31□□□□□ -0.6
Chchd1Q9CQA6 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC11.31□□□□□ -0.6
Chchd1Q9CQA6 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC11.31□□□□□ -0.6
Chchd1Q9CQA6 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC11.31□□□□□ -0.6
Chchd1Q9CQA6 AC163280.1-201ENSMUST00000228194 1100 ntBASIC11.31□□□□□ -0.6
Chchd1Q9CQA6 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chchd1Q9CQA6 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chchd1Q9CQA6 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chchd1Q9CQA6 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.31□□□□□ -0.6
Chchd1Q9CQA6 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms