Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Krt88Q9CPR6 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Krt88Q9CPR6 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Krt88Q9CPR6 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.54□□□□□ -0.24
Krt88Q9CPR6 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Krt88Q9CPR6 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Krt88Q9CPR6 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Krt88Q9CPR6 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Krt88Q9CPR6 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Krt88Q9CPR6 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Krt88Q9CPR6 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Krt88Q9CPR6 Gm13312-201ENSMUST00000119631 718 ntBASIC13.54□□□□□ -0.24
Krt88Q9CPR6 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Krt88Q9CPR6 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.54□□□□□ -0.24
Krt88Q9CPR6 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Krt88Q9CPR6 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC13.54□□□□□ -0.24
Krt88Q9CPR6 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.54□□□□□ -0.24
Krt88Q9CPR6 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Krt88Q9CPR6 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Krt88Q9CPR6 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Krt88Q9CPR6 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Krt88Q9CPR6 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Krt88Q9CPR6 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Krt88Q9CPR6 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Krt88Q9CPR6 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.54□□□□□ -0.24
Krt88Q9CPR6 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Krt88Q9CPR6 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Krt88Q9CPR6 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Krt88Q9CPR6 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt88Q9CPR6 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt88Q9CPR6 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt88Q9CPR6 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt88Q9CPR6 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Krt88Q9CPR6 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt88Q9CPR6 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt88Q9CPR6 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt88Q9CPR6 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC13.53□□□□□ -0.24
Krt88Q9CPR6 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt88Q9CPR6 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Krt88Q9CPR6 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt88Q9CPR6 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt88Q9CPR6 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt88Q9CPR6 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt88Q9CPR6 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Krt88Q9CPR6 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt88Q9CPR6 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt88Q9CPR6 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt88Q9CPR6 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt88Q9CPR6 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Krt88Q9CPR6 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt88Q9CPR6 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt88Q9CPR6 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt88Q9CPR6 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt88Q9CPR6 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Krt88Q9CPR6 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt88Q9CPR6 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt88Q9CPR6 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Krt88Q9CPR6 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Krt88Q9CPR6 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Krt88Q9CPR6 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Krt88Q9CPR6 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Krt88Q9CPR6 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Krt88Q9CPR6 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Krt88Q9CPR6 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Krt88Q9CPR6 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Krt88Q9CPR6 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Krt88Q9CPR6 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Krt88Q9CPR6 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.52□□□□□ -0.25
Krt88Q9CPR6 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Krt88Q9CPR6 Gm23547-201ENSMUST00000158210 271 ntBASIC13.52□□□□□ -0.25
Krt88Q9CPR6 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.52□□□□□ -0.25
Krt88Q9CPR6 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC13.52□□□□□ -0.25
Krt88Q9CPR6 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.52□□□□□ -0.25
Krt88Q9CPR6 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.52□□□□□ -0.25
Krt88Q9CPR6 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Krt88Q9CPR6 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Krt88Q9CPR6 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Krt88Q9CPR6 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.52□□□□□ -0.25
Krt88Q9CPR6 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Krt88Q9CPR6 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.52□□□□□ -0.25
Krt88Q9CPR6 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Krt88Q9CPR6 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Krt88Q9CPR6 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Krt88Q9CPR6 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Krt88Q9CPR6 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Krt88Q9CPR6 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Krt88Q9CPR6 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Krt88Q9CPR6 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Krt88Q9CPR6 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Krt88Q9CPR6 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.52□□□□□ -0.25
Krt88Q9CPR6 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Krt88Q9CPR6 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Krt88Q9CPR6 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Krt88Q9CPR6 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Krt88Q9CPR6 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Krt88Q9CPR6 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Krt88Q9CPR6 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Krt88Q9CPR6 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Krt88Q9CPR6 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Krt88Q9CPR6 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms