Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.3□□□□□ -0.44
Prpf8Q99PV0 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Prpf8Q99PV0 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Prpf8Q99PV0 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Prpf8Q99PV0 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Prpf8Q99PV0 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Prpf8Q99PV0 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Prpf8Q99PV0 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Prpf8Q99PV0 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Prpf8Q99PV0 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Prpf8Q99PV0 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Prpf8Q99PV0 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Prpf8Q99PV0 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Prpf8Q99PV0 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf8Q99PV0 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.29□□□□□ -0.44
Prpf8Q99PV0 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.29□□□□□ -0.44
Prpf8Q99PV0 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf8Q99PV0 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf8Q99PV0 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Prpf8Q99PV0 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf8Q99PV0 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Prpf8Q99PV0 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf8Q99PV0 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf8Q99PV0 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf8Q99PV0 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf8Q99PV0 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Prpf8Q99PV0 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf8Q99PV0 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf8Q99PV0 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf8Q99PV0 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf8Q99PV0 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf8Q99PV0 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf8Q99PV0 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.29□□□□□ -0.44
Prpf8Q99PV0 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Prpf8Q99PV0 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC12.29□□□□□ -0.44
Prpf8Q99PV0 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf8Q99PV0 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf8Q99PV0 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.29□□□□□ -0.44
Prpf8Q99PV0 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf8Q99PV0 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf8Q99PV0 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Prpf8Q99PV0 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf8Q99PV0 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf8Q99PV0 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf8Q99PV0 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.28□□□□□ -0.44
Prpf8Q99PV0 Gm27680-201ENSMUST00000184192 160 ntBASIC12.28□□□□□ -0.44
Prpf8Q99PV0 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf8Q99PV0 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf8Q99PV0 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf8Q99PV0 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf8Q99PV0 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf8Q99PV0 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Prpf8Q99PV0 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC12.28□□□□□ -0.44
Prpf8Q99PV0 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf8Q99PV0 Gm17837-201ENSMUST00000186435 985 ntBASIC12.28□□□□□ -0.44
Prpf8Q99PV0 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.28□□□□□ -0.44
Prpf8Q99PV0 Gm10253-201ENSMUST00000194270 940 ntBASIC12.28□□□□□ -0.44
Prpf8Q99PV0 Gm5779-201ENSMUST00000218467 910 ntBASIC12.28□□□□□ -0.44
Prpf8Q99PV0 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf8Q99PV0 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf8Q99PV0 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf8Q99PV0 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf8Q99PV0 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf8Q99PV0 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf8Q99PV0 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.28□□□□□ -0.44
Prpf8Q99PV0 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf8Q99PV0 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Prpf8Q99PV0 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf8Q99PV0 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf8Q99PV0 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf8Q99PV0 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf8Q99PV0 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Prpf8Q99PV0 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Prpf8Q99PV0 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Prpf8Q99PV0 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Prpf8Q99PV0 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Prpf8Q99PV0 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Prpf8Q99PV0 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.27□□□□□ -0.44
Prpf8Q99PV0 Gm38294-201ENSMUST00000192831 381 ntBASIC12.27□□□□□ -0.44
Prpf8Q99PV0 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Prpf8Q99PV0 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.27□□□□□ -0.44
Prpf8Q99PV0 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Prpf8Q99PV0 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.27□□□□□ -0.44
Prpf8Q99PV0 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Prpf8Q99PV0 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Prpf8Q99PV0 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Prpf8Q99PV0 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Prpf8Q99PV0 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Prpf8Q99PV0 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Prpf8Q99PV0 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
Prpf8Q99PV0 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Prpf8Q99PV0 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Prpf8Q99PV0 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Prpf8Q99PV0 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Prpf8Q99PV0 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Prpf8Q99PV0 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Prpf8Q99PV0 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Prpf8Q99PV0 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.27□□□□□ -0.45
Prpf8Q99PV0 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.27□□□□□ -0.45
Prpf8Q99PV0 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms