Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim8Q99PJ2 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim8Q99PJ2 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim8Q99PJ2 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim8Q99PJ2 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim8Q99PJ2 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim8Q99PJ2 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.71□□□□□ -0.05
Trim8Q99PJ2 Gm12134-201ENSMUST00000122109 520 ntBASIC14.71□□□□□ -0.05
Trim8Q99PJ2 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.71□□□□□ -0.05
Trim8Q99PJ2 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.71□□□□□ -0.05
Trim8Q99PJ2 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.71□□□□□ -0.05
Trim8Q99PJ2 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.71□□□□□ -0.05
Trim8Q99PJ2 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim8Q99PJ2 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
Trim8Q99PJ2 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim8Q99PJ2 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim8Q99PJ2 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.71□□□□□ -0.05
Trim8Q99PJ2 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trim8Q99PJ2 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim8Q99PJ2 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim8Q99PJ2 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.71□□□□□ -0.05
Trim8Q99PJ2 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim8Q99PJ2 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trim8Q99PJ2 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim8Q99PJ2 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim8Q99PJ2 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim8Q99PJ2 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.71□□□□□ -0.06
Trim8Q99PJ2 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim8Q99PJ2 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim8Q99PJ2 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Trim8Q99PJ2 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim8Q99PJ2 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim8Q99PJ2 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim8Q99PJ2 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim8Q99PJ2 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim8Q99PJ2 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trim8Q99PJ2 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim8Q99PJ2 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim8Q99PJ2 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim8Q99PJ2 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trim8Q99PJ2 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim8Q99PJ2 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
Trim8Q99PJ2 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim8Q99PJ2 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.7□□□□□ -0.06
Trim8Q99PJ2 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.7□□□□□ -0.06
Trim8Q99PJ2 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.7□□□□□ -0.06
Trim8Q99PJ2 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim8Q99PJ2 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim8Q99PJ2 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
Trim8Q99PJ2 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.7□□□□□ -0.06
Trim8Q99PJ2 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.7□□□□□ -0.06
Trim8Q99PJ2 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.7□□□□□ -0.06
Trim8Q99PJ2 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.7□□□□□ -0.06
Trim8Q99PJ2 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.7□□□□□ -0.06
Trim8Q99PJ2 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim8Q99PJ2 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim8Q99PJ2 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim8Q99PJ2 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim8Q99PJ2 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim8Q99PJ2 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim8Q99PJ2 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.7□□□□□ -0.06
Trim8Q99PJ2 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trim8Q99PJ2 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim8Q99PJ2 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim8Q99PJ2 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.7□□□□□ -0.06
Trim8Q99PJ2 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim8Q99PJ2 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trim8Q99PJ2 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim8Q99PJ2 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim8Q99PJ2 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim8Q99PJ2 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim8Q99PJ2 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.69□□□□□ -0.06
Trim8Q99PJ2 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim8Q99PJ2 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim8Q99PJ2 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim8Q99PJ2 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim8Q99PJ2 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim8Q99PJ2 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim8Q99PJ2 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim8Q99PJ2 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim8Q99PJ2 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Trim8Q99PJ2 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Trim8Q99PJ2 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.69□□□□□ -0.06
Trim8Q99PJ2 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim8Q99PJ2 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim8Q99PJ2 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Trim8Q99PJ2 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim8Q99PJ2 Gm17807-201ENSMUST00000186869 298 ntBASIC14.69□□□□□ -0.06
Trim8Q99PJ2 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.69□□□□□ -0.06
Trim8Q99PJ2 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim8Q99PJ2 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Trim8Q99PJ2 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim8Q99PJ2 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim8Q99PJ2 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim8Q99PJ2 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim8Q99PJ2 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.69□□□□□ -0.06
Trim8Q99PJ2 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.69□□□□□ -0.06
Trim8Q99PJ2 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim8Q99PJ2 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim8Q99PJ2 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms