Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn4Q99P72 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn4Q99P72 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC19.24■□□□□ 0.67
Rtn4Q99P72 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn4Q99P72 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn4Q99P72 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Rtn4Q99P72 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn4Q99P72 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn4Q99P72 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC19.24■□□□□ 0.67
Rtn4Q99P72 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn4Q99P72 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn4Q99P72 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn4Q99P72 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Rtn4Q99P72 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Rtn4Q99P72 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn4Q99P72 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn4Q99P72 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn4Q99P72 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn4Q99P72 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn4Q99P72 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn4Q99P72 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Rtn4Q99P72 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn4Q99P72 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn4Q99P72 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn4Q99P72 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC19.23■□□□□ 0.67
Rtn4Q99P72 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn4Q99P72 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn4Q99P72 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn4Q99P72 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn4Q99P72 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn4Q99P72 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Rtn4Q99P72 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn4Q99P72 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn4Q99P72 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn4Q99P72 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC19.22■□□□□ 0.67
Rtn4Q99P72 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Rtn4Q99P72 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn4Q99P72 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn4Q99P72 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn4Q99P72 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Rtn4Q99P72 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn4Q99P72 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn4Q99P72 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn4Q99P72 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC19.22■□□□□ 0.67
Rtn4Q99P72 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn4Q99P72 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn4Q99P72 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn4Q99P72 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Rtn4Q99P72 Gm17271-201ENSMUST00000165535 355 ntBASIC19.22■□□□□ 0.67
Rtn4Q99P72 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC19.22■□□□□ 0.67
Rtn4Q99P72 Gm9682-201ENSMUST00000197505 556 ntBASIC19.22■□□□□ 0.67
Rtn4Q99P72 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Rtn4Q99P72 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC19.22■□□□□ 0.67
Rtn4Q99P72 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn4Q99P72 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn4Q99P72 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn4Q99P72 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn4Q99P72 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn4Q99P72 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC19.22■□□□□ 0.67
Rtn4Q99P72 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn4Q99P72 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn4Q99P72 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Rtn4Q99P72 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn4Q99P72 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC19.22■□□□□ 0.67
Rtn4Q99P72 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn4Q99P72 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn4Q99P72 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rtn4Q99P72 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rtn4Q99P72 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rtn4Q99P72 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rtn4Q99P72 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rtn4Q99P72 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rtn4Q99P72 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Rtn4Q99P72 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rtn4Q99P72 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC19.21■□□□□ 0.67
Rtn4Q99P72 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rtn4Q99P72 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC19.21■□□□□ 0.67
Rtn4Q99P72 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC19.21■□□□□ 0.67
Rtn4Q99P72 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC19.21■□□□□ 0.67
Rtn4Q99P72 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC19.21■□□□□ 0.67
Rtn4Q99P72 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rtn4Q99P72 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rtn4Q99P72 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rtn4Q99P72 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rtn4Q99P72 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC19.21■□□□□ 0.67
Rtn4Q99P72 Gm10175-201ENSMUST00000086013 645 ntBASIC19.21■□□□□ 0.67
Rtn4Q99P72 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rtn4Q99P72 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rtn4Q99P72 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Rtn4Q99P72 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rtn4Q99P72 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rtn4Q99P72 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rtn4Q99P72 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rtn4Q99P72 Gm43352-201ENSMUST00000196419 3065 ntBASIC19.2■□□□□ 0.66
Rtn4Q99P72 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC19.2■□□□□ 0.66
Rtn4Q99P72 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC19.2■□□□□ 0.66
Rtn4Q99P72 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rtn4Q99P72 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rtn4Q99P72 Gm15626-201ENSMUST00000117478 868 ntBASIC19.2■□□□□ 0.66
Rtn4Q99P72 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms