Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp1b1Q99LU0 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Chmp1b1Q99LU0 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Chmp1b1Q99LU0 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp1b1Q99LU0 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.18□□□□□ -0.14
Chmp1b1Q99LU0 Gm14722-201ENSMUST00000118943 689 ntBASIC14.18□□□□□ -0.14
Chmp1b1Q99LU0 Gm18733-201ENSMUST00000173950 856 ntBASIC14.18□□□□□ -0.14
Chmp1b1Q99LU0 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Chmp1b1Q99LU0 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
Chmp1b1Q99LU0 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
Chmp1b1Q99LU0 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Chmp1b1Q99LU0 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.18□□□□□ -0.14
Chmp1b1Q99LU0 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Chmp1b1Q99LU0 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Chmp1b1Q99LU0 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.18□□□□□ -0.14
Chmp1b1Q99LU0 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp1b1Q99LU0 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp1b1Q99LU0 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp1b1Q99LU0 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Chmp1b1Q99LU0 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp1b1Q99LU0 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.18□□□□□ -0.14
Chmp1b1Q99LU0 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp1b1Q99LU0 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp1b1Q99LU0 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp1b1Q99LU0 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.18□□□□□ -0.14
Chmp1b1Q99LU0 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.18□□□□□ -0.14
Chmp1b1Q99LU0 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.18□□□□□ -0.14
Chmp1b1Q99LU0 Asic1-205ENSMUST00000228185 1818 ntBASIC14.18□□□□□ -0.14
Chmp1b1Q99LU0 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp1b1Q99LU0 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp1b1Q99LU0 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp1b1Q99LU0 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.17□□□□□ -0.14
Chmp1b1Q99LU0 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp1b1Q99LU0 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp1b1Q99LU0 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp1b1Q99LU0 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp1b1Q99LU0 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Chmp1b1Q99LU0 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp1b1Q99LU0 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp1b1Q99LU0 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp1b1Q99LU0 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.17□□□□□ -0.14
Chmp1b1Q99LU0 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp1b1Q99LU0 Gm6089-201ENSMUST00000197666 938 ntBASIC14.17□□□□□ -0.14
Chmp1b1Q99LU0 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Chmp1b1Q99LU0 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp1b1Q99LU0 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.17□□□□□ -0.14
Chmp1b1Q99LU0 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp1b1Q99LU0 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp1b1Q99LU0 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp1b1Q99LU0 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp1b1Q99LU0 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp1b1Q99LU0 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp1b1Q99LU0 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp1b1Q99LU0 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp1b1Q99LU0 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp1b1Q99LU0 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Chmp1b1Q99LU0 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp1b1Q99LU0 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp1b1Q99LU0 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp1b1Q99LU0 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp1b1Q99LU0 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp1b1Q99LU0 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp1b1Q99LU0 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp1b1Q99LU0 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp1b1Q99LU0 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp1b1Q99LU0 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.16□□□□□ -0.14
Chmp1b1Q99LU0 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp1b1Q99LU0 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Chmp1b1Q99LU0 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.16□□□□□ -0.14
Chmp1b1Q99LU0 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp1b1Q99LU0 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp1b1Q99LU0 Gm7222-201ENSMUST00000117512 906 ntBASIC14.16□□□□□ -0.14
Chmp1b1Q99LU0 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp1b1Q99LU0 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.16□□□□□ -0.14
Chmp1b1Q99LU0 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp1b1Q99LU0 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp1b1Q99LU0 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp1b1Q99LU0 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp1b1Q99LU0 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.16□□□□□ -0.14
Chmp1b1Q99LU0 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.16□□□□□ -0.14
Chmp1b1Q99LU0 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.16□□□□□ -0.14
Chmp1b1Q99LU0 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp1b1Q99LU0 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Chmp1b1Q99LU0 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.16□□□□□ -0.14
Chmp1b1Q99LU0 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp1b1Q99LU0 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp1b1Q99LU0 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Chmp1b1Q99LU0 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp1b1Q99LU0 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp1b1Q99LU0 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp1b1Q99LU0 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp1b1Q99LU0 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Chmp1b1Q99LU0 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp1b1Q99LU0 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp1b1Q99LU0 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp1b1Q99LU0 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp1b1Q99LU0 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp1b1Q99LU0 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp1b1Q99LU0 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp1b1Q99LU0 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms