Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vmp1Q99KU0 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vmp1Q99KU0 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vmp1Q99KU0 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vmp1Q99KU0 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vmp1Q99KU0 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vmp1Q99KU0 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vmp1Q99KU0 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vmp1Q99KU0 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vmp1Q99KU0 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vmp1Q99KU0 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vmp1Q99KU0 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.46□□□□□ -0.09
Vmp1Q99KU0 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.46□□□□□ -0.09
Vmp1Q99KU0 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vmp1Q99KU0 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vmp1Q99KU0 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vmp1Q99KU0 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vmp1Q99KU0 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vmp1Q99KU0 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vmp1Q99KU0 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Vmp1Q99KU0 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.46□□□□□ -0.09
Vmp1Q99KU0 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vmp1Q99KU0 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vmp1Q99KU0 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.46□□□□□ -0.09
Vmp1Q99KU0 Gm6550-201ENSMUST00000187574 993 ntBASIC14.46□□□□□ -0.09
Vmp1Q99KU0 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vmp1Q99KU0 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.46□□□□□ -0.09
Vmp1Q99KU0 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
Vmp1Q99KU0 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.46□□□□□ -0.09
Vmp1Q99KU0 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vmp1Q99KU0 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vmp1Q99KU0 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Vmp1Q99KU0 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vmp1Q99KU0 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vmp1Q99KU0 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vmp1Q99KU0 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Vmp1Q99KU0 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vmp1Q99KU0 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vmp1Q99KU0 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.45□□□□□ -0.1
Vmp1Q99KU0 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vmp1Q99KU0 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Vmp1Q99KU0 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vmp1Q99KU0 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vmp1Q99KU0 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vmp1Q99KU0 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC14.45□□□□□ -0.1
Vmp1Q99KU0 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Vmp1Q99KU0 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vmp1Q99KU0 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.45□□□□□ -0.1
Vmp1Q99KU0 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vmp1Q99KU0 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vmp1Q99KU0 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vmp1Q99KU0 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.45□□□□□ -0.1
Vmp1Q99KU0 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vmp1Q99KU0 Mir5126-201ENSMUST00000175513 77 ntBASIC14.45□□□□□ -0.1
Vmp1Q99KU0 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vmp1Q99KU0 Gm27646-201ENSMUST00000183989 110 ntBASIC14.45□□□□□ -0.1
Vmp1Q99KU0 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Vmp1Q99KU0 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vmp1Q99KU0 AV026068-213ENSMUST00000223675 1171 ntBASIC14.45□□□□□ -0.1
Vmp1Q99KU0 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vmp1Q99KU0 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vmp1Q99KU0 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vmp1Q99KU0 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vmp1Q99KU0 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vmp1Q99KU0 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vmp1Q99KU0 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Vmp1Q99KU0 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vmp1Q99KU0 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vmp1Q99KU0 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vmp1Q99KU0 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vmp1Q99KU0 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vmp1Q99KU0 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Vmp1Q99KU0 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vmp1Q99KU0 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vmp1Q99KU0 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Vmp1Q99KU0 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vmp1Q99KU0 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vmp1Q99KU0 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vmp1Q99KU0 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vmp1Q99KU0 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.44□□□□□ -0.1
Vmp1Q99KU0 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
Vmp1Q99KU0 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Vmp1Q99KU0 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vmp1Q99KU0 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vmp1Q99KU0 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vmp1Q99KU0 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vmp1Q99KU0 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vmp1Q99KU0 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Vmp1Q99KU0 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vmp1Q99KU0 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vmp1Q99KU0 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Vmp1Q99KU0 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vmp1Q99KU0 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Vmp1Q99KU0 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vmp1Q99KU0 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vmp1Q99KU0 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.44□□□□□ -0.1
Vmp1Q99KU0 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vmp1Q99KU0 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vmp1Q99KU0 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vmp1Q99KU0 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms