Protein–RNA interactions for Protein: Q925F3

Rnf144a, E3 ubiquitin-protein ligase RNF144A, mousemouse

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf144aQ925F3 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf144aQ925F3 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf144aQ925F3 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf144aQ925F3 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.42□□□□□ -0.1
Rnf144aQ925F3 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Rnf144aQ925F3 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf144aQ925F3 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf144aQ925F3 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf144aQ925F3 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf144aQ925F3 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf144aQ925F3 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Rnf144aQ925F3 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf144aQ925F3 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf144aQ925F3 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Rnf144aQ925F3 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf144aQ925F3 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf144aQ925F3 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf144aQ925F3 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf144aQ925F3 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf144aQ925F3 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf144aQ925F3 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf144aQ925F3 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rnf144aQ925F3 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf144aQ925F3 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf144aQ925F3 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Rnf144aQ925F3 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.41□□□□□ -0.1
Rnf144aQ925F3 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf144aQ925F3 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.41□□□□□ -0.1
Rnf144aQ925F3 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf144aQ925F3 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf144aQ925F3 Mir8117-201ENSMUST00000184773 107 ntBASIC14.41□□□□□ -0.1
Rnf144aQ925F3 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf144aQ925F3 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.41□□□□□ -0.1
Rnf144aQ925F3 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.41□□□□□ -0.1
Rnf144aQ925F3 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Rnf144aQ925F3 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Rnf144aQ925F3 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf144aQ925F3 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf144aQ925F3 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf144aQ925F3 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf144aQ925F3 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf144aQ925F3 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf144aQ925F3 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf144aQ925F3 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf144aQ925F3 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf144aQ925F3 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.41□□□□□ -0.1
Rnf144aQ925F3 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
Rnf144aQ925F3 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rnf144aQ925F3 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf144aQ925F3 Efs-202ENSMUST00000227037 2540 ntBASIC14.41□□□□□ -0.1
Rnf144aQ925F3 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Rnf144aQ925F3 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf144aQ925F3 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Rnf144aQ925F3 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.41□□□□□ -0.1
Rnf144aQ925F3 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf144aQ925F3 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf144aQ925F3 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf144aQ925F3 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rnf144aQ925F3 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rnf144aQ925F3 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf144aQ925F3 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf144aQ925F3 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.4□□□□□ -0.1
Rnf144aQ925F3 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Rnf144aQ925F3 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf144aQ925F3 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf144aQ925F3 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf144aQ925F3 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf144aQ925F3 Gm6736-201ENSMUST00000166583 948 ntBASIC14.4□□□□□ -0.1
Rnf144aQ925F3 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.4□□□□□ -0.1
Rnf144aQ925F3 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.4□□□□□ -0.1
Rnf144aQ925F3 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.4□□□□□ -0.1
Rnf144aQ925F3 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.4□□□□□ -0.1
Rnf144aQ925F3 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf144aQ925F3 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf144aQ925F3 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf144aQ925F3 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf144aQ925F3 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf144aQ925F3 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf144aQ925F3 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf144aQ925F3 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.4□□□□□ -0.1
Rnf144aQ925F3 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf144aQ925F3 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf144aQ925F3 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf144aQ925F3 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Rnf144aQ925F3 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf144aQ925F3 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf144aQ925F3 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Rnf144aQ925F3 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf144aQ925F3 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf144aQ925F3 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf144aQ925F3 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf144aQ925F3 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf144aQ925F3 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf144aQ925F3 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Rnf144aQ925F3 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf144aQ925F3 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf144aQ925F3 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.39□□□□□ -0.11
Rnf144aQ925F3 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf144aQ925F3 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf144aQ925F3 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms