Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb2Q91Y00 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb2Q91Y00 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb2Q91Y00 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb2Q91Y00 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb2Q91Y00 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.9■□□□□ 0.14
Pcdhb2Q91Y00 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb2Q91Y00 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb2Q91Y00 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb2Q91Y00 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb2Q91Y00 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.9■□□□□ 0.14
Pcdhb2Q91Y00 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
Pcdhb2Q91Y00 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
Pcdhb2Q91Y00 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb2Q91Y00 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb2Q91Y00 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.9■□□□□ 0.14
Pcdhb2Q91Y00 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.9■□□□□ 0.14
Pcdhb2Q91Y00 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.9■□□□□ 0.14
Pcdhb2Q91Y00 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.9■□□□□ 0.14
Pcdhb2Q91Y00 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb2Q91Y00 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb2Q91Y00 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb2Q91Y00 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb2Q91Y00 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb2Q91Y00 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb2Q91Y00 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb2Q91Y00 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb2Q91Y00 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb2Q91Y00 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb2Q91Y00 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb2Q91Y00 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb2Q91Y00 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.89■□□□□ 0.13
Pcdhb2Q91Y00 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb2Q91Y00 Celf4-206ENSMUST00000224553 1729 ntBASIC15.89■□□□□ 0.13
Pcdhb2Q91Y00 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.89■□□□□ 0.13
Pcdhb2Q91Y00 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb2Q91Y00 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Pcdhb2Q91Y00 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb2Q91Y00 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb2Q91Y00 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb2Q91Y00 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb2Q91Y00 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb2Q91Y00 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb2Q91Y00 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb2Q91Y00 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb2Q91Y00 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb2Q91Y00 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb2Q91Y00 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb2Q91Y00 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb2Q91Y00 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb2Q91Y00 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Pcdhb2Q91Y00 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.89■□□□□ 0.13
Pcdhb2Q91Y00 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb2Q91Y00 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb2Q91Y00 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Pcdhb2Q91Y00 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb2Q91Y00 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Pcdhb2Q91Y00 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Pcdhb2Q91Y00 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb2Q91Y00 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdhb2Q91Y00 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb2Q91Y00 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb2Q91Y00 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb2Q91Y00 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb2Q91Y00 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdhb2Q91Y00 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdhb2Q91Y00 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb2Q91Y00 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Pcdhb2Q91Y00 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdhb2Q91Y00 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.88■□□□□ 0.13
Pcdhb2Q91Y00 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb2Q91Y00 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb2Q91Y00 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.88■□□□□ 0.13
Pcdhb2Q91Y00 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Pcdhb2Q91Y00 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb2Q91Y00 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb2Q91Y00 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb2Q91Y00 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.88■□□□□ 0.13
Pcdhb2Q91Y00 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb2Q91Y00 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb2Q91Y00 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Pcdhb2Q91Y00 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Pcdhb2Q91Y00 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb2Q91Y00 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb2Q91Y00 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Pcdhb2Q91Y00 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Pcdhb2Q91Y00 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb2Q91Y00 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb2Q91Y00 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
Pcdhb2Q91Y00 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Pcdhb2Q91Y00 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb2Q91Y00 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb2Q91Y00 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb2Q91Y00 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb2Q91Y00 Gm4995-201ENSMUST00000117247 432 ntBASIC15.87■□□□□ 0.13
Pcdhb2Q91Y00 Gm15427-201ENSMUST00000117288 531 ntBASIC15.87■□□□□ 0.13
Pcdhb2Q91Y00 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.87■□□□□ 0.13
Pcdhb2Q91Y00 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.87■□□□□ 0.13
Pcdhb2Q91Y00 Gm25911-201ENSMUST00000157621 56 ntBASIC15.87■□□□□ 0.13
Pcdhb2Q91Y00 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms