Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Gm5479-201ENSMUST00000160578 435 ntBASIC15.91■□□□□ 0.14
TraipQ8VIG6 Gm25144-201ENSMUST00000179561 110 ntBASIC15.91■□□□□ 0.14
TraipQ8VIG6 Gm25352-201ENSMUST00000179815 110 ntBASIC15.91■□□□□ 0.14
TraipQ8VIG6 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.91■□□□□ 0.14
TraipQ8VIG6 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TraipQ8VIG6 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TraipQ8VIG6 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
TraipQ8VIG6 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TraipQ8VIG6 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
TraipQ8VIG6 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC15.91■□□□□ 0.14
TraipQ8VIG6 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TraipQ8VIG6 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
TraipQ8VIG6 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TraipQ8VIG6 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
TraipQ8VIG6 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TraipQ8VIG6 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TraipQ8VIG6 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TraipQ8VIG6 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TraipQ8VIG6 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TraipQ8VIG6 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TraipQ8VIG6 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.9■□□□□ 0.14
TraipQ8VIG6 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.9■□□□□ 0.14
TraipQ8VIG6 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.9■□□□□ 0.14
TraipQ8VIG6 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TraipQ8VIG6 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TraipQ8VIG6 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TraipQ8VIG6 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
TraipQ8VIG6 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TraipQ8VIG6 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TraipQ8VIG6 Gm8749-201ENSMUST00000117737 331 ntBASIC15.9■□□□□ 0.14
TraipQ8VIG6 Gm6415-201ENSMUST00000118488 348 ntBASIC15.9■□□□□ 0.14
TraipQ8VIG6 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TraipQ8VIG6 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.9■□□□□ 0.14
TraipQ8VIG6 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TraipQ8VIG6 Gm27306-201ENSMUST00000183970 107 ntBASIC15.9■□□□□ 0.14
TraipQ8VIG6 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TraipQ8VIG6 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TraipQ8VIG6 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TraipQ8VIG6 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TraipQ8VIG6 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TraipQ8VIG6 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TraipQ8VIG6 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TraipQ8VIG6 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TraipQ8VIG6 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TraipQ8VIG6 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
TraipQ8VIG6 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TraipQ8VIG6 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TraipQ8VIG6 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TraipQ8VIG6 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.89■□□□□ 0.14
TraipQ8VIG6 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.89■□□□□ 0.13
TraipQ8VIG6 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TraipQ8VIG6 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TraipQ8VIG6 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
TraipQ8VIG6 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TraipQ8VIG6 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TraipQ8VIG6 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TraipQ8VIG6 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TraipQ8VIG6 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC15.89■□□□□ 0.13
TraipQ8VIG6 Gm13464-201ENSMUST00000119418 935 ntBASIC15.89■□□□□ 0.13
TraipQ8VIG6 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC15.89■□□□□ 0.13
TraipQ8VIG6 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TraipQ8VIG6 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC15.89■□□□□ 0.13
TraipQ8VIG6 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC15.89■□□□□ 0.13
TraipQ8VIG6 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.89■□□□□ 0.13
TraipQ8VIG6 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TraipQ8VIG6 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TraipQ8VIG6 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TraipQ8VIG6 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
TraipQ8VIG6 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.89■□□□□ 0.13
TraipQ8VIG6 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TraipQ8VIG6 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.89■□□□□ 0.13
TraipQ8VIG6 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TraipQ8VIG6 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TraipQ8VIG6 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TraipQ8VIG6 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.88■□□□□ 0.13
TraipQ8VIG6 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TraipQ8VIG6 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.88■□□□□ 0.13
TraipQ8VIG6 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TraipQ8VIG6 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC15.88■□□□□ 0.13
TraipQ8VIG6 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
TraipQ8VIG6 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.88■□□□□ 0.13
TraipQ8VIG6 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.88■□□□□ 0.13
TraipQ8VIG6 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.88■□□□□ 0.13
TraipQ8VIG6 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TraipQ8VIG6 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TraipQ8VIG6 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TraipQ8VIG6 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TraipQ8VIG6 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.88■□□□□ 0.13
TraipQ8VIG6 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.88■□□□□ 0.13
TraipQ8VIG6 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
TraipQ8VIG6 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TraipQ8VIG6 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TraipQ8VIG6 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TraipQ8VIG6 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TraipQ8VIG6 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TraipQ8VIG6 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TraipQ8VIG6 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TraipQ8VIG6 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TraipQ8VIG6 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.87■□□□□ 0.13
TraipQ8VIG6 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms