Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rab40bQ8VHP8 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rab40bQ8VHP8 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rab40bQ8VHP8 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.49□□□□□ -0.25
Rab40bQ8VHP8 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rab40bQ8VHP8 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rab40bQ8VHP8 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40bQ8VHP8 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40bQ8VHP8 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.48□□□□□ -0.25
Rab40bQ8VHP8 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40bQ8VHP8 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40bQ8VHP8 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40bQ8VHP8 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40bQ8VHP8 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Rab40bQ8VHP8 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40bQ8VHP8 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40bQ8VHP8 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40bQ8VHP8 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40bQ8VHP8 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40bQ8VHP8 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Rab40bQ8VHP8 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40bQ8VHP8 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.48□□□□□ -0.25
Rab40bQ8VHP8 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40bQ8VHP8 Gm12497-201ENSMUST00000138778 237 ntBASIC13.48□□□□□ -0.25
Rab40bQ8VHP8 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40bQ8VHP8 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40bQ8VHP8 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40bQ8VHP8 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Rab40bQ8VHP8 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Rab40bQ8VHP8 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.48□□□□□ -0.25
Rab40bQ8VHP8 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40bQ8VHP8 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40bQ8VHP8 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40bQ8VHP8 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40bQ8VHP8 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40bQ8VHP8 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
Rab40bQ8VHP8 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40bQ8VHP8 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40bQ8VHP8 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40bQ8VHP8 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rab40bQ8VHP8 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rab40bQ8VHP8 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rab40bQ8VHP8 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rab40bQ8VHP8 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rab40bQ8VHP8 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rab40bQ8VHP8 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Rab40bQ8VHP8 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rab40bQ8VHP8 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rab40bQ8VHP8 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rab40bQ8VHP8 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Rab40bQ8VHP8 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.47□□□□□ -0.25
Rab40bQ8VHP8 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rab40bQ8VHP8 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC13.47□□□□□ -0.25
Rab40bQ8VHP8 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rab40bQ8VHP8 Gm17808-201ENSMUST00000200859 894 ntBASIC13.47□□□□□ -0.25
Rab40bQ8VHP8 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.47□□□□□ -0.25
Rab40bQ8VHP8 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.47□□□□□ -0.25
Rab40bQ8VHP8 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rab40bQ8VHP8 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.47□□□□□ -0.25
Rab40bQ8VHP8 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rab40bQ8VHP8 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rab40bQ8VHP8 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rab40bQ8VHP8 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rab40bQ8VHP8 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Rab40bQ8VHP8 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rab40bQ8VHP8 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rab40bQ8VHP8 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rab40bQ8VHP8 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rab40bQ8VHP8 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.47□□□□□ -0.25
Rab40bQ8VHP8 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Rab40bQ8VHP8 Gm8258-201ENSMUST00000055593 1449 ntBASIC13.47□□□□□ -0.25
Rab40bQ8VHP8 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rab40bQ8VHP8 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.46□□□□□ -0.25
Rab40bQ8VHP8 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rab40bQ8VHP8 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rab40bQ8VHP8 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.46□□□□□ -0.25
Rab40bQ8VHP8 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Rab40bQ8VHP8 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rab40bQ8VHP8 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rab40bQ8VHP8 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rab40bQ8VHP8 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rab40bQ8VHP8 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rab40bQ8VHP8 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rab40bQ8VHP8 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rab40bQ8VHP8 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rab40bQ8VHP8 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rab40bQ8VHP8 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rab40bQ8VHP8 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rab40bQ8VHP8 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rab40bQ8VHP8 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rab40bQ8VHP8 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rab40bQ8VHP8 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.46□□□□□ -0.25
Rab40bQ8VHP8 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rab40bQ8VHP8 Gm15358-201ENSMUST00000119249 520 ntBASIC13.46□□□□□ -0.25
Rab40bQ8VHP8 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.46□□□□□ -0.25
Rab40bQ8VHP8 Gm25016-201ENSMUST00000158399 131 ntBASIC13.46□□□□□ -0.25
Rab40bQ8VHP8 Gm25745-201ENSMUST00000174945 133 ntBASIC13.46□□□□□ -0.25
Rab40bQ8VHP8 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rab40bQ8VHP8 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.46□□□□□ -0.25
Rab40bQ8VHP8 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms