Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps4aQ8VEJ9 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Vps4aQ8VEJ9 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.57□□□□□ -0.08
Vps4aQ8VEJ9 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.57□□□□□ -0.08
Vps4aQ8VEJ9 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps4aQ8VEJ9 AV026068-213ENSMUST00000223675 1171 ntBASIC14.57□□□□□ -0.08
Vps4aQ8VEJ9 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Vps4aQ8VEJ9 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps4aQ8VEJ9 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vps4aQ8VEJ9 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.57□□□□□ -0.08
Vps4aQ8VEJ9 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Vps4aQ8VEJ9 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Vps4aQ8VEJ9 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps4aQ8VEJ9 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps4aQ8VEJ9 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
Vps4aQ8VEJ9 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps4aQ8VEJ9 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps4aQ8VEJ9 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps4aQ8VEJ9 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps4aQ8VEJ9 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps4aQ8VEJ9 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vps4aQ8VEJ9 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps4aQ8VEJ9 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps4aQ8VEJ9 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vps4aQ8VEJ9 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps4aQ8VEJ9 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps4aQ8VEJ9 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Vps4aQ8VEJ9 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps4aQ8VEJ9 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps4aQ8VEJ9 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vps4aQ8VEJ9 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vps4aQ8VEJ9 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps4aQ8VEJ9 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps4aQ8VEJ9 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps4aQ8VEJ9 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps4aQ8VEJ9 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps4aQ8VEJ9 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps4aQ8VEJ9 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vps4aQ8VEJ9 Gm9727-201ENSMUST00000161387 555 ntBASIC14.56□□□□□ -0.08
Vps4aQ8VEJ9 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vps4aQ8VEJ9 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.56□□□□□ -0.08
Vps4aQ8VEJ9 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps4aQ8VEJ9 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps4aQ8VEJ9 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Vps4aQ8VEJ9 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.56□□□□□ -0.08
Vps4aQ8VEJ9 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps4aQ8VEJ9 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.56□□□□□ -0.08
Vps4aQ8VEJ9 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps4aQ8VEJ9 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vps4aQ8VEJ9 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps4aQ8VEJ9 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vps4aQ8VEJ9 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vps4aQ8VEJ9 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps4aQ8VEJ9 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Vps4aQ8VEJ9 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.56□□□□□ -0.08
Vps4aQ8VEJ9 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps4aQ8VEJ9 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps4aQ8VEJ9 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.55□□□□□ -0.08
Vps4aQ8VEJ9 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vps4aQ8VEJ9 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps4aQ8VEJ9 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps4aQ8VEJ9 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vps4aQ8VEJ9 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps4aQ8VEJ9 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps4aQ8VEJ9 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.55□□□□□ -0.08
Vps4aQ8VEJ9 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Vps4aQ8VEJ9 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vps4aQ8VEJ9 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Vps4aQ8VEJ9 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps4aQ8VEJ9 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.55□□□□□ -0.08
Vps4aQ8VEJ9 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.55□□□□□ -0.08
Vps4aQ8VEJ9 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vps4aQ8VEJ9 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.55□□□□□ -0.08
Vps4aQ8VEJ9 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.55□□□□□ -0.08
Vps4aQ8VEJ9 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.55□□□□□ -0.08
Vps4aQ8VEJ9 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.55□□□□□ -0.08
Vps4aQ8VEJ9 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.55□□□□□ -0.08
Vps4aQ8VEJ9 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vps4aQ8VEJ9 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps4aQ8VEJ9 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vps4aQ8VEJ9 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps4aQ8VEJ9 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Vps4aQ8VEJ9 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps4aQ8VEJ9 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Vps4aQ8VEJ9 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps4aQ8VEJ9 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps4aQ8VEJ9 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.55□□□□□ -0.08
Vps4aQ8VEJ9 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.55□□□□□ -0.08
Vps4aQ8VEJ9 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps4aQ8VEJ9 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps4aQ8VEJ9 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vps4aQ8VEJ9 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps4aQ8VEJ9 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps4aQ8VEJ9 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps4aQ8VEJ9 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps4aQ8VEJ9 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Vps4aQ8VEJ9 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps4aQ8VEJ9 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps4aQ8VEJ9 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps4aQ8VEJ9 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms