Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc1Q8VCB1 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ndc1Q8VCB1 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc1Q8VCB1 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc1Q8VCB1 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc1Q8VCB1 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
Ndc1Q8VCB1 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc1Q8VCB1 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc1Q8VCB1 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc1Q8VCB1 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc1Q8VCB1 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc1Q8VCB1 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Ndc1Q8VCB1 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
Ndc1Q8VCB1 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ndc1Q8VCB1 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ndc1Q8VCB1 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ndc1Q8VCB1 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Ndc1Q8VCB1 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ndc1Q8VCB1 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.14□□□□□ -0.15
Ndc1Q8VCB1 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ndc1Q8VCB1 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ndc1Q8VCB1 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ndc1Q8VCB1 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ndc1Q8VCB1 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ndc1Q8VCB1 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ndc1Q8VCB1 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ndc1Q8VCB1 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ndc1Q8VCB1 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ndc1Q8VCB1 Gm14701-201ENSMUST00000117156 348 ntBASIC14.14□□□□□ -0.15
Ndc1Q8VCB1 Mir1895-201ENSMUST00000122615 79 ntBASIC14.14□□□□□ -0.15
Ndc1Q8VCB1 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.14□□□□□ -0.15
Ndc1Q8VCB1 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.14□□□□□ -0.15
Ndc1Q8VCB1 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Ndc1Q8VCB1 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.14□□□□□ -0.15
Ndc1Q8VCB1 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.14□□□□□ -0.15
Ndc1Q8VCB1 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ndc1Q8VCB1 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ndc1Q8VCB1 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ndc1Q8VCB1 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Ndc1Q8VCB1 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ndc1Q8VCB1 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.14□□□□□ -0.15
Ndc1Q8VCB1 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ndc1Q8VCB1 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
Ndc1Q8VCB1 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.14□□□□□ -0.15
Ndc1Q8VCB1 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.14□□□□□ -0.15
Ndc1Q8VCB1 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ndc1Q8VCB1 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Ndc1Q8VCB1 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ndc1Q8VCB1 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ndc1Q8VCB1 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Ndc1Q8VCB1 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ndc1Q8VCB1 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ndc1Q8VCB1 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.13□□□□□ -0.15
Ndc1Q8VCB1 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ndc1Q8VCB1 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ndc1Q8VCB1 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ndc1Q8VCB1 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.13□□□□□ -0.15
Ndc1Q8VCB1 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ndc1Q8VCB1 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Ndc1Q8VCB1 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ndc1Q8VCB1 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.13□□□□□ -0.15
Ndc1Q8VCB1 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ndc1Q8VCB1 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ndc1Q8VCB1 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ndc1Q8VCB1 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ndc1Q8VCB1 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Ndc1Q8VCB1 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ndc1Q8VCB1 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.13□□□□□ -0.15
Ndc1Q8VCB1 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ndc1Q8VCB1 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ndc1Q8VCB1 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Ndc1Q8VCB1 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ndc1Q8VCB1 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ndc1Q8VCB1 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ndc1Q8VCB1 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ndc1Q8VCB1 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ndc1Q8VCB1 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ndc1Q8VCB1 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ndc1Q8VCB1 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ndc1Q8VCB1 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Ndc1Q8VCB1 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ndc1Q8VCB1 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ndc1Q8VCB1 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ndc1Q8VCB1 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ndc1Q8VCB1 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ndc1Q8VCB1 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ndc1Q8VCB1 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ndc1Q8VCB1 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ndc1Q8VCB1 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ndc1Q8VCB1 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ndc1Q8VCB1 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ndc1Q8VCB1 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Ndc1Q8VCB1 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ndc1Q8VCB1 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ndc1Q8VCB1 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.12□□□□□ -0.15
Ndc1Q8VCB1 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ndc1Q8VCB1 Gm11025-201ENSMUST00000140773 466 ntBASIC14.12□□□□□ -0.15
Ndc1Q8VCB1 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.12□□□□□ -0.15
Ndc1Q8VCB1 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ndc1Q8VCB1 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms