Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Rnf8Q8VC56 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf8Q8VC56 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf8Q8VC56 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.47□□□□□ -0.09
Rnf8Q8VC56 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Rnf8Q8VC56 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf8Q8VC56 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf8Q8VC56 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf8Q8VC56 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf8Q8VC56 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf8Q8VC56 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf8Q8VC56 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf8Q8VC56 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf8Q8VC56 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.46□□□□□ -0.09
Rnf8Q8VC56 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf8Q8VC56 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Rnf8Q8VC56 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf8Q8VC56 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf8Q8VC56 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf8Q8VC56 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.46□□□□□ -0.09
Rnf8Q8VC56 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf8Q8VC56 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf8Q8VC56 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Rnf8Q8VC56 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Rnf8Q8VC56 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Rnf8Q8VC56 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf8Q8VC56 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf8Q8VC56 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf8Q8VC56 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
Rnf8Q8VC56 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rnf8Q8VC56 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rnf8Q8VC56 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rnf8Q8VC56 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Rnf8Q8VC56 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Rnf8Q8VC56 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rnf8Q8VC56 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Rnf8Q8VC56 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.46□□□□□ -0.1
Rnf8Q8VC56 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.45□□□□□ -0.1
Rnf8Q8VC56 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf8Q8VC56 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf8Q8VC56 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Rnf8Q8VC56 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.45□□□□□ -0.1
Rnf8Q8VC56 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf8Q8VC56 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf8Q8VC56 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf8Q8VC56 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf8Q8VC56 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.45□□□□□ -0.1
Rnf8Q8VC56 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.45□□□□□ -0.1
Rnf8Q8VC56 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.45□□□□□ -0.1
Rnf8Q8VC56 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf8Q8VC56 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf8Q8VC56 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf8Q8VC56 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf8Q8VC56 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.45□□□□□ -0.1
Rnf8Q8VC56 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf8Q8VC56 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf8Q8VC56 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.45□□□□□ -0.1
Rnf8Q8VC56 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf8Q8VC56 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf8Q8VC56 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Rnf8Q8VC56 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf8Q8VC56 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf8Q8VC56 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf8Q8VC56 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf8Q8VC56 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf8Q8VC56 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf8Q8VC56 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Rnf8Q8VC56 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf8Q8VC56 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf8Q8VC56 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Rnf8Q8VC56 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf8Q8VC56 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.44□□□□□ -0.1
Rnf8Q8VC56 Gm8344-201ENSMUST00000119813 856 ntBASIC14.44□□□□□ -0.1
Rnf8Q8VC56 Gm7862-201ENSMUST00000121461 292 ntBASIC14.44□□□□□ -0.1
Rnf8Q8VC56 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Rnf8Q8VC56 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.44□□□□□ -0.1
Rnf8Q8VC56 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf8Q8VC56 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf8Q8VC56 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf8Q8VC56 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Rnf8Q8VC56 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.44□□□□□ -0.1
Rnf8Q8VC56 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Rnf8Q8VC56 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.44□□□□□ -0.1
Rnf8Q8VC56 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.44□□□□□ -0.1
Rnf8Q8VC56 Gm6296-201ENSMUST00000222599 943 ntBASIC14.44□□□□□ -0.1
Rnf8Q8VC56 Mzt1-203ENSMUST00000227948 952 ntBASIC14.44□□□□□ -0.1
Rnf8Q8VC56 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf8Q8VC56 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.44□□□□□ -0.1
Rnf8Q8VC56 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Rnf8Q8VC56 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf8Q8VC56 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.44□□□□□ -0.1
Rnf8Q8VC56 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf8Q8VC56 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf8Q8VC56 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf8Q8VC56 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf8Q8VC56 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Rnf8Q8VC56 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf8Q8VC56 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Rnf8Q8VC56 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Rnf8Q8VC56 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms