Protein–RNA interactions for Protein: Q8R4P5

Tmc1, Transmembrane channel-like protein 1, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmc1Q8R4P5 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tmc1Q8R4P5 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tmc1Q8R4P5 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tmc1Q8R4P5 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tmc1Q8R4P5 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC18.33■□□□□ 0.52
Tmc1Q8R4P5 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tmc1Q8R4P5 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tmc1Q8R4P5 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tmc1Q8R4P5 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tmc1Q8R4P5 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tmc1Q8R4P5 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tmc1Q8R4P5 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tmc1Q8R4P5 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tmc1Q8R4P5 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tmc1Q8R4P5 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Tmc1Q8R4P5 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC18.32■□□□□ 0.52
Tmc1Q8R4P5 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tmc1Q8R4P5 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC18.32■□□□□ 0.52
Tmc1Q8R4P5 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Tmc1Q8R4P5 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tmc1Q8R4P5 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tmc1Q8R4P5 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tmc1Q8R4P5 Gm27867-201ENSMUST00000184778 125 ntBASIC18.32■□□□□ 0.52
Tmc1Q8R4P5 AW822252-206ENSMUST00000208904 237 ntBASIC18.32■□□□□ 0.52
Tmc1Q8R4P5 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.32■□□□□ 0.52
Tmc1Q8R4P5 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tmc1Q8R4P5 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.32■□□□□ 0.52
Tmc1Q8R4P5 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tmc1Q8R4P5 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tmc1Q8R4P5 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC18.32■□□□□ 0.52
Tmc1Q8R4P5 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tmc1Q8R4P5 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tmc1Q8R4P5 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tmc1Q8R4P5 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tmc1Q8R4P5 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tmc1Q8R4P5 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tmc1Q8R4P5 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tmc1Q8R4P5 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tmc1Q8R4P5 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tmc1Q8R4P5 Gm42471-201ENSMUST00000201457 1865 ntBASIC18.31■□□□□ 0.52
Tmc1Q8R4P5 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tmc1Q8R4P5 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Tmc1Q8R4P5 Gm37019-201ENSMUST00000192133 2134 ntBASIC18.31■□□□□ 0.52
Tmc1Q8R4P5 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tmc1Q8R4P5 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tmc1Q8R4P5 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tmc1Q8R4P5 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tmc1Q8R4P5 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tmc1Q8R4P5 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tmc1Q8R4P5 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.31■□□□□ 0.52
Tmc1Q8R4P5 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Tmc1Q8R4P5 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.31■□□□□ 0.52
Tmc1Q8R4P5 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tmc1Q8R4P5 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tmc1Q8R4P5 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tmc1Q8R4P5 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tmc1Q8R4P5 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tmc1Q8R4P5 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tmc1Q8R4P5 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tmc1Q8R4P5 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tmc1Q8R4P5 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC18.3■□□□□ 0.52
Tmc1Q8R4P5 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tmc1Q8R4P5 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tmc1Q8R4P5 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tmc1Q8R4P5 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tmc1Q8R4P5 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tmc1Q8R4P5 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tmc1Q8R4P5 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tmc1Q8R4P5 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.3■□□□□ 0.52
Tmc1Q8R4P5 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Tmc1Q8R4P5 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.3■□□□□ 0.52
Tmc1Q8R4P5 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.3■□□□□ 0.52
Tmc1Q8R4P5 Gm18622-201ENSMUST00000219361 595 ntBASIC18.3■□□□□ 0.52
Tmc1Q8R4P5 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.3■□□□□ 0.52
Tmc1Q8R4P5 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tmc1Q8R4P5 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC18.3■□□□□ 0.52
Tmc1Q8R4P5 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Tmc1Q8R4P5 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tmc1Q8R4P5 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tmc1Q8R4P5 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tmc1Q8R4P5 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Tmc1Q8R4P5 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tmc1Q8R4P5 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tmc1Q8R4P5 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tmc1Q8R4P5 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tmc1Q8R4P5 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tmc1Q8R4P5 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tmc1Q8R4P5 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.3■□□□□ 0.52
Tmc1Q8R4P5 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tmc1Q8R4P5 AC159649.2-201ENSMUST00000222984 3223 ntBASIC18.29■□□□□ 0.52
Tmc1Q8R4P5 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tmc1Q8R4P5 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Tmc1Q8R4P5 AC157650.3-201ENSMUST00000225058 1476 ntBASIC18.29■□□□□ 0.52
Tmc1Q8R4P5 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Tmc1Q8R4P5 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tmc1Q8R4P5 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Tmc1Q8R4P5 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC18.29■□□□□ 0.52
Tmc1Q8R4P5 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tmc1Q8R4P5 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tmc1Q8R4P5 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms