Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC16.03■□□□□ 0.16
Rpp40Q8R1F9 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rpp40Q8R1F9 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.03■□□□□ 0.16
Rpp40Q8R1F9 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Rpp40Q8R1F9 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rpp40Q8R1F9 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rpp40Q8R1F9 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rpp40Q8R1F9 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rpp40Q8R1F9 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rpp40Q8R1F9 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rpp40Q8R1F9 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rpp40Q8R1F9 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rpp40Q8R1F9 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Rpp40Q8R1F9 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Rpp40Q8R1F9 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rpp40Q8R1F9 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rpp40Q8R1F9 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Rpp40Q8R1F9 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rpp40Q8R1F9 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rpp40Q8R1F9 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rpp40Q8R1F9 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rpp40Q8R1F9 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rpp40Q8R1F9 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rpp40Q8R1F9 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rpp40Q8R1F9 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Rpp40Q8R1F9 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rpp40Q8R1F9 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Rpp40Q8R1F9 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rpp40Q8R1F9 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rpp40Q8R1F9 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rpp40Q8R1F9 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.02■□□□□ 0.16
Rpp40Q8R1F9 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.02■□□□□ 0.16
Rpp40Q8R1F9 Gm15483-201ENSMUST00000120338 456 ntBASIC16.02■□□□□ 0.16
Rpp40Q8R1F9 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Rpp40Q8R1F9 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.02■□□□□ 0.16
Rpp40Q8R1F9 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.02■□□□□ 0.16
Rpp40Q8R1F9 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.02■□□□□ 0.16
Rpp40Q8R1F9 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rpp40Q8R1F9 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rpp40Q8R1F9 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rpp40Q8R1F9 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rpp40Q8R1F9 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rpp40Q8R1F9 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rpp40Q8R1F9 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
Rpp40Q8R1F9 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rpp40Q8R1F9 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rpp40Q8R1F9 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rpp40Q8R1F9 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rpp40Q8R1F9 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rpp40Q8R1F9 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rpp40Q8R1F9 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rpp40Q8R1F9 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rpp40Q8R1F9 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rpp40Q8R1F9 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rpp40Q8R1F9 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
Rpp40Q8R1F9 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rpp40Q8R1F9 Gm6973-201ENSMUST00000117080 721 ntBASIC16.01■□□□□ 0.15
Rpp40Q8R1F9 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.01■□□□□ 0.15
Rpp40Q8R1F9 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rpp40Q8R1F9 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Rpp40Q8R1F9 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.01■□□□□ 0.15
Rpp40Q8R1F9 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rpp40Q8R1F9 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rpp40Q8R1F9 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
Rpp40Q8R1F9 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rpp40Q8R1F9 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rpp40Q8R1F9 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
Rpp40Q8R1F9 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rpp40Q8R1F9 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rpp40Q8R1F9 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rpp40Q8R1F9 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Rpp40Q8R1F9 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rpp40Q8R1F9 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Rpp40Q8R1F9 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rpp40Q8R1F9 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16■□□□□ 0.15
Rpp40Q8R1F9 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rpp40Q8R1F9 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rpp40Q8R1F9 Gm14026-201ENSMUST00000120625 1789 ntBASIC16■□□□□ 0.15
Rpp40Q8R1F9 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rpp40Q8R1F9 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rpp40Q8R1F9 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rpp40Q8R1F9 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rpp40Q8R1F9 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rpp40Q8R1F9 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rpp40Q8R1F9 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16■□□□□ 0.15
Rpp40Q8R1F9 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16■□□□□ 0.15
Rpp40Q8R1F9 Gm29340-201ENSMUST00000188763 3854 ntBASIC16■□□□□ 0.15
Rpp40Q8R1F9 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Rpp40Q8R1F9 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rpp40Q8R1F9 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Rpp40Q8R1F9 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rpp40Q8R1F9 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rpp40Q8R1F9 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16■□□□□ 0.15
Rpp40Q8R1F9 Rprl2-201ENSMUST00000157150 290 ntBASIC16■□□□□ 0.15
Rpp40Q8R1F9 Gm26308-201ENSMUST00000157768 69 ntBASIC16■□□□□ 0.15
Rpp40Q8R1F9 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16■□□□□ 0.15
Rpp40Q8R1F9 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Rpp40Q8R1F9 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rpp40Q8R1F9 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16■□□□□ 0.15
Rpp40Q8R1F9 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms