Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vopp1Q8R1C3 Gm7488-201ENSMUST00000117148 684 ntBASIC15.74■□□□□ 0.11
Vopp1Q8R1C3 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.74■□□□□ 0.11
Vopp1Q8R1C3 Gm24694-201ENSMUST00000180054 110 ntBASIC15.74■□□□□ 0.11
Vopp1Q8R1C3 Gm27663-201ENSMUST00000184839 110 ntBASIC15.74■□□□□ 0.11
Vopp1Q8R1C3 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC15.74■□□□□ 0.11
Vopp1Q8R1C3 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vopp1Q8R1C3 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Vopp1Q8R1C3 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.74■□□□□ 0.11
Vopp1Q8R1C3 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vopp1Q8R1C3 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vopp1Q8R1C3 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.74■□□□□ 0.11
Vopp1Q8R1C3 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vopp1Q8R1C3 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vopp1Q8R1C3 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Vopp1Q8R1C3 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.74■□□□□ 0.11
Vopp1Q8R1C3 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vopp1Q8R1C3 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.73■□□□□ 0.11
Vopp1Q8R1C3 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vopp1Q8R1C3 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vopp1Q8R1C3 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vopp1Q8R1C3 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vopp1Q8R1C3 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vopp1Q8R1C3 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vopp1Q8R1C3 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Vopp1Q8R1C3 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vopp1Q8R1C3 Gm22189-201ENSMUST00000103822 86 ntBASIC15.73■□□□□ 0.11
Vopp1Q8R1C3 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Vopp1Q8R1C3 AC124732.1-201ENSMUST00000221551 910 ntBASIC15.73■□□□□ 0.11
Vopp1Q8R1C3 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Vopp1Q8R1C3 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Vopp1Q8R1C3 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vopp1Q8R1C3 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vopp1Q8R1C3 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vopp1Q8R1C3 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Vopp1Q8R1C3 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Vopp1Q8R1C3 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vopp1Q8R1C3 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
Vopp1Q8R1C3 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vopp1Q8R1C3 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vopp1Q8R1C3 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vopp1Q8R1C3 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vopp1Q8R1C3 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vopp1Q8R1C3 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vopp1Q8R1C3 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Vopp1Q8R1C3 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vopp1Q8R1C3 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vopp1Q8R1C3 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vopp1Q8R1C3 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vopp1Q8R1C3 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vopp1Q8R1C3 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vopp1Q8R1C3 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vopp1Q8R1C3 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
Vopp1Q8R1C3 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vopp1Q8R1C3 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vopp1Q8R1C3 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC15.72■□□□□ 0.11
Vopp1Q8R1C3 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC15.72■□□□□ 0.11
Vopp1Q8R1C3 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Vopp1Q8R1C3 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC15.72■□□□□ 0.11
Vopp1Q8R1C3 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vopp1Q8R1C3 Gm10275-202ENSMUST00000168697 495 ntBASIC15.72■□□□□ 0.11
Vopp1Q8R1C3 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC15.72■□□□□ 0.11
Vopp1Q8R1C3 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC15.72■□□□□ 0.11
Vopp1Q8R1C3 Gm44855-201ENSMUST00000205725 362 ntBASIC15.72■□□□□ 0.11
Vopp1Q8R1C3 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC15.72■□□□□ 0.11
Vopp1Q8R1C3 Gm46209-201ENSMUST00000217912 553 ntBASIC15.72■□□□□ 0.11
Vopp1Q8R1C3 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vopp1Q8R1C3 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Vopp1Q8R1C3 Gm10275-201ENSMUST00000092620 635 ntBASIC15.72■□□□□ 0.11
Vopp1Q8R1C3 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC15.72■□□□□ 0.11
Vopp1Q8R1C3 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vopp1Q8R1C3 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vopp1Q8R1C3 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vopp1Q8R1C3 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vopp1Q8R1C3 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vopp1Q8R1C3 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC15.72■□□□□ 0.11
Vopp1Q8R1C3 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Vopp1Q8R1C3 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vopp1Q8R1C3 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vopp1Q8R1C3 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vopp1Q8R1C3 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vopp1Q8R1C3 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vopp1Q8R1C3 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vopp1Q8R1C3 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vopp1Q8R1C3 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vopp1Q8R1C3 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vopp1Q8R1C3 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vopp1Q8R1C3 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vopp1Q8R1C3 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vopp1Q8R1C3 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC15.71■□□□□ 0.11
Vopp1Q8R1C3 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Vopp1Q8R1C3 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vopp1Q8R1C3 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vopp1Q8R1C3 Gm15653-201ENSMUST00000119247 907 ntBASIC15.71■□□□□ 0.11
Vopp1Q8R1C3 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vopp1Q8R1C3 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vopp1Q8R1C3 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Vopp1Q8R1C3 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vopp1Q8R1C3 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vopp1Q8R1C3 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms