Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atf7Q8R0S1 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atf7Q8R0S1 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atf7Q8R0S1 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atf7Q8R0S1 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC17.66■□□□□ 0.42
Atf7Q8R0S1 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atf7Q8R0S1 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atf7Q8R0S1 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atf7Q8R0S1 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.66■□□□□ 0.42
Atf7Q8R0S1 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.66■□□□□ 0.42
Atf7Q8R0S1 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atf7Q8R0S1 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atf7Q8R0S1 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.66■□□□□ 0.42
Atf7Q8R0S1 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.66■□□□□ 0.42
Atf7Q8R0S1 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atf7Q8R0S1 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atf7Q8R0S1 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atf7Q8R0S1 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Atf7Q8R0S1 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Atf7Q8R0S1 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atf7Q8R0S1 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atf7Q8R0S1 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Atf7Q8R0S1 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atf7Q8R0S1 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atf7Q8R0S1 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Atf7Q8R0S1 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Atf7Q8R0S1 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atf7Q8R0S1 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.65■□□□□ 0.42
Atf7Q8R0S1 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atf7Q8R0S1 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atf7Q8R0S1 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Atf7Q8R0S1 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Atf7Q8R0S1 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atf7Q8R0S1 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atf7Q8R0S1 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Atf7Q8R0S1 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Atf7Q8R0S1 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.64■□□□□ 0.42
Atf7Q8R0S1 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.64■□□□□ 0.42
Atf7Q8R0S1 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Atf7Q8R0S1 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atf7Q8R0S1 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atf7Q8R0S1 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Atf7Q8R0S1 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atf7Q8R0S1 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atf7Q8R0S1 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atf7Q8R0S1 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Atf7Q8R0S1 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atf7Q8R0S1 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Atf7Q8R0S1 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atf7Q8R0S1 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Atf7Q8R0S1 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Atf7Q8R0S1 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.64■□□□□ 0.41
Atf7Q8R0S1 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Atf7Q8R0S1 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atf7Q8R0S1 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atf7Q8R0S1 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atf7Q8R0S1 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atf7Q8R0S1 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atf7Q8R0S1 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atf7Q8R0S1 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atf7Q8R0S1 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Atf7Q8R0S1 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Atf7Q8R0S1 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Atf7Q8R0S1 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Atf7Q8R0S1 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atf7Q8R0S1 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atf7Q8R0S1 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Atf7Q8R0S1 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Atf7Q8R0S1 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Atf7Q8R0S1 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Atf7Q8R0S1 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Atf7Q8R0S1 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atf7Q8R0S1 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Atf7Q8R0S1 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Atf7Q8R0S1 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atf7Q8R0S1 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atf7Q8R0S1 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atf7Q8R0S1 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC17.63■□□□□ 0.41
Atf7Q8R0S1 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.63■□□□□ 0.41
Atf7Q8R0S1 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.63■□□□□ 0.41
Atf7Q8R0S1 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.63■□□□□ 0.41
Atf7Q8R0S1 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Atf7Q8R0S1 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.63■□□□□ 0.41
Atf7Q8R0S1 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Atf7Q8R0S1 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atf7Q8R0S1 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atf7Q8R0S1 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Atf7Q8R0S1 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
Atf7Q8R0S1 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atf7Q8R0S1 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Atf7Q8R0S1 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Atf7Q8R0S1 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Atf7Q8R0S1 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Atf7Q8R0S1 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Atf7Q8R0S1 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atf7Q8R0S1 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atf7Q8R0S1 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Atf7Q8R0S1 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Atf7Q8R0S1 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atf7Q8R0S1 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms