Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shtn1Q8K2Q9 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shtn1Q8K2Q9 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shtn1Q8K2Q9 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shtn1Q8K2Q9 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Shtn1Q8K2Q9 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Shtn1Q8K2Q9 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.61■□□□□ 0.41
Shtn1Q8K2Q9 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shtn1Q8K2Q9 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.61■□□□□ 0.41
Shtn1Q8K2Q9 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shtn1Q8K2Q9 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shtn1Q8K2Q9 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shtn1Q8K2Q9 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Shtn1Q8K2Q9 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shtn1Q8K2Q9 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC17.61■□□□□ 0.41
Shtn1Q8K2Q9 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Shtn1Q8K2Q9 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shtn1Q8K2Q9 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.61■□□□□ 0.41
Shtn1Q8K2Q9 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shtn1Q8K2Q9 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Shtn1Q8K2Q9 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Shtn1Q8K2Q9 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shtn1Q8K2Q9 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shtn1Q8K2Q9 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Shtn1Q8K2Q9 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shtn1Q8K2Q9 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shtn1Q8K2Q9 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Shtn1Q8K2Q9 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Shtn1Q8K2Q9 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shtn1Q8K2Q9 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shtn1Q8K2Q9 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Shtn1Q8K2Q9 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Shtn1Q8K2Q9 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Shtn1Q8K2Q9 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shtn1Q8K2Q9 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Shtn1Q8K2Q9 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shtn1Q8K2Q9 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shtn1Q8K2Q9 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Shtn1Q8K2Q9 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shtn1Q8K2Q9 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shtn1Q8K2Q9 Gm6539-201ENSMUST00000119157 1064 ntBASIC17.6■□□□□ 0.41
Shtn1Q8K2Q9 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC17.6■□□□□ 0.41
Shtn1Q8K2Q9 Gm6745-201ENSMUST00000199216 526 ntBASIC17.6■□□□□ 0.41
Shtn1Q8K2Q9 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC17.6■□□□□ 0.41
Shtn1Q8K2Q9 Shd-206ENSMUST00000225145 998 ntBASIC17.6■□□□□ 0.41
Shtn1Q8K2Q9 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shtn1Q8K2Q9 Gm25857-201ENSMUST00000082788 129 ntBASIC17.6■□□□□ 0.41
Shtn1Q8K2Q9 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Shtn1Q8K2Q9 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Shtn1Q8K2Q9 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shtn1Q8K2Q9 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.6■□□□□ 0.41
Shtn1Q8K2Q9 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shtn1Q8K2Q9 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Shtn1Q8K2Q9 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Shtn1Q8K2Q9 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shtn1Q8K2Q9 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shtn1Q8K2Q9 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Shtn1Q8K2Q9 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shtn1Q8K2Q9 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shtn1Q8K2Q9 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shtn1Q8K2Q9 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Shtn1Q8K2Q9 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shtn1Q8K2Q9 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC17.59■□□□□ 0.41
Shtn1Q8K2Q9 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shtn1Q8K2Q9 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shtn1Q8K2Q9 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shtn1Q8K2Q9 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shtn1Q8K2Q9 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shtn1Q8K2Q9 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shtn1Q8K2Q9 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC17.59■□□□□ 0.41
Shtn1Q8K2Q9 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.59■□□□□ 0.41
Shtn1Q8K2Q9 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Shtn1Q8K2Q9 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Shtn1Q8K2Q9 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Shtn1Q8K2Q9 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shtn1Q8K2Q9 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC17.59■□□□□ 0.41
Shtn1Q8K2Q9 AC125350.2-201ENSMUST00000224737 727 ntBASIC17.59■□□□□ 0.41
Shtn1Q8K2Q9 Gm6180-201ENSMUST00000065243 498 ntBASIC17.59■□□□□ 0.41
Shtn1Q8K2Q9 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Shtn1Q8K2Q9 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.58■□□□□ 0.41
Shtn1Q8K2Q9 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Shtn1Q8K2Q9 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Shtn1Q8K2Q9 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Shtn1Q8K2Q9 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Shtn1Q8K2Q9 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.58■□□□□ 0.41
Shtn1Q8K2Q9 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Shtn1Q8K2Q9 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Shtn1Q8K2Q9 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Shtn1Q8K2Q9 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Shtn1Q8K2Q9 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Shtn1Q8K2Q9 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Shtn1Q8K2Q9 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shtn1Q8K2Q9 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Shtn1Q8K2Q9 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shtn1Q8K2Q9 Gm24694-201ENSMUST00000180054 110 ntBASIC17.58■□□□□ 0.4
Shtn1Q8K2Q9 Gm27663-201ENSMUST00000184839 110 ntBASIC17.58■□□□□ 0.4
Shtn1Q8K2Q9 Gm43433-201ENSMUST00000196573 481 ntBASIC17.58■□□□□ 0.4
Shtn1Q8K2Q9 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC17.58■□□□□ 0.4
Shtn1Q8K2Q9 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC17.58■□□□□ 0.4
Shtn1Q8K2Q9 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms