Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cchcr1Q8K2I2 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cchcr1Q8K2I2 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cchcr1Q8K2I2 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cchcr1Q8K2I2 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cchcr1Q8K2I2 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cchcr1Q8K2I2 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cchcr1Q8K2I2 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cchcr1Q8K2I2 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Cchcr1Q8K2I2 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Cchcr1Q8K2I2 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cchcr1Q8K2I2 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cchcr1Q8K2I2 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cchcr1Q8K2I2 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cchcr1Q8K2I2 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cchcr1Q8K2I2 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cchcr1Q8K2I2 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Cchcr1Q8K2I2 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cchcr1Q8K2I2 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Cchcr1Q8K2I2 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cchcr1Q8K2I2 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.72■□□□□ 0.43
Cchcr1Q8K2I2 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cchcr1Q8K2I2 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.72■□□□□ 0.43
Cchcr1Q8K2I2 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Cchcr1Q8K2I2 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Cchcr1Q8K2I2 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cchcr1Q8K2I2 Gm45504-201ENSMUST00000211407 2107 ntBASIC17.72■□□□□ 0.43
Cchcr1Q8K2I2 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cchcr1Q8K2I2 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cchcr1Q8K2I2 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Cchcr1Q8K2I2 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Cchcr1Q8K2I2 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cchcr1Q8K2I2 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cchcr1Q8K2I2 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cchcr1Q8K2I2 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cchcr1Q8K2I2 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cchcr1Q8K2I2 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cchcr1Q8K2I2 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cchcr1Q8K2I2 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cchcr1Q8K2I2 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cchcr1Q8K2I2 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cchcr1Q8K2I2 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cchcr1Q8K2I2 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cchcr1Q8K2I2 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cchcr1Q8K2I2 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cchcr1Q8K2I2 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
Cchcr1Q8K2I2 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cchcr1Q8K2I2 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.71■□□□□ 0.43
Cchcr1Q8K2I2 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.71■□□□□ 0.43
Cchcr1Q8K2I2 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.71■□□□□ 0.43
Cchcr1Q8K2I2 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.71■□□□□ 0.43
Cchcr1Q8K2I2 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cchcr1Q8K2I2 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cchcr1Q8K2I2 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cchcr1Q8K2I2 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cchcr1Q8K2I2 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cchcr1Q8K2I2 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cchcr1Q8K2I2 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Cchcr1Q8K2I2 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Cchcr1Q8K2I2 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.42
Cchcr1Q8K2I2 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.42
Cchcr1Q8K2I2 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cchcr1Q8K2I2 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cchcr1Q8K2I2 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cchcr1Q8K2I2 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cchcr1Q8K2I2 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cchcr1Q8K2I2 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cchcr1Q8K2I2 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cchcr1Q8K2I2 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cchcr1Q8K2I2 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cchcr1Q8K2I2 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Cchcr1Q8K2I2 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
Cchcr1Q8K2I2 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cchcr1Q8K2I2 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cchcr1Q8K2I2 Gm24589-201ENSMUST00000116692 94 ntBASIC17.7■□□□□ 0.42
Cchcr1Q8K2I2 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cchcr1Q8K2I2 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cchcr1Q8K2I2 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cchcr1Q8K2I2 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cchcr1Q8K2I2 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cchcr1Q8K2I2 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cchcr1Q8K2I2 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cchcr1Q8K2I2 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cchcr1Q8K2I2 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cchcr1Q8K2I2 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cchcr1Q8K2I2 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Cchcr1Q8K2I2 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC17.7■□□□□ 0.42
Cchcr1Q8K2I2 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cchcr1Q8K2I2 Gm12620-201ENSMUST00000119791 1986 ntBASIC17.7■□□□□ 0.42
Cchcr1Q8K2I2 Gm12612-201ENSMUST00000140182 1986 ntBASIC17.7■□□□□ 0.42
Cchcr1Q8K2I2 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cchcr1Q8K2I2 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cchcr1Q8K2I2 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cchcr1Q8K2I2 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cchcr1Q8K2I2 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cchcr1Q8K2I2 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cchcr1Q8K2I2 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cchcr1Q8K2I2 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC17.69■□□□□ 0.42
Cchcr1Q8K2I2 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cchcr1Q8K2I2 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms