Protein–RNA interactions for Protein: Q8JZS7

Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcll1Q8JZS7 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgcll1Q8JZS7 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.4■□□□□ 0.06
Hmgcll1Q8JZS7 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Hmgcll1Q8JZS7 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.4■□□□□ 0.06
Hmgcll1Q8JZS7 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgcll1Q8JZS7 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgcll1Q8JZS7 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.4■□□□□ 0.06
Hmgcll1Q8JZS7 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgcll1Q8JZS7 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgcll1Q8JZS7 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgcll1Q8JZS7 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgcll1Q8JZS7 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgcll1Q8JZS7 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgcll1Q8JZS7 Mir449b-201ENSMUST00000104833 80 ntBASIC15.4■□□□□ 0.06
Hmgcll1Q8JZS7 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgcll1Q8JZS7 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.4■□□□□ 0.06
Hmgcll1Q8JZS7 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgcll1Q8JZS7 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.4■□□□□ 0.06
Hmgcll1Q8JZS7 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC15.4■□□□□ 0.06
Hmgcll1Q8JZS7 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.4■□□□□ 0.06
Hmgcll1Q8JZS7 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.4■□□□□ 0.06
Hmgcll1Q8JZS7 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgcll1Q8JZS7 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.4■□□□□ 0.06
Hmgcll1Q8JZS7 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgcll1Q8JZS7 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgcll1Q8JZS7 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgcll1Q8JZS7 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgcll1Q8JZS7 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgcll1Q8JZS7 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgcll1Q8JZS7 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgcll1Q8JZS7 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgcll1Q8JZS7 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgcll1Q8JZS7 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgcll1Q8JZS7 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgcll1Q8JZS7 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgcll1Q8JZS7 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgcll1Q8JZS7 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgcll1Q8JZS7 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Hmgcll1Q8JZS7 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Hmgcll1Q8JZS7 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgcll1Q8JZS7 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgcll1Q8JZS7 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgcll1Q8JZS7 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgcll1Q8JZS7 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgcll1Q8JZS7 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgcll1Q8JZS7 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgcll1Q8JZS7 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgcll1Q8JZS7 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgcll1Q8JZS7 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgcll1Q8JZS7 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.39■□□□□ 0.05
Hmgcll1Q8JZS7 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Hmgcll1Q8JZS7 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.39■□□□□ 0.05
Hmgcll1Q8JZS7 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.39■□□□□ 0.05
Hmgcll1Q8JZS7 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC15.39■□□□□ 0.05
Hmgcll1Q8JZS7 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgcll1Q8JZS7 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.39■□□□□ 0.05
Hmgcll1Q8JZS7 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.39■□□□□ 0.05
Hmgcll1Q8JZS7 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgcll1Q8JZS7 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgcll1Q8JZS7 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgcll1Q8JZS7 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.39■□□□□ 0.05
Hmgcll1Q8JZS7 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgcll1Q8JZS7 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Hmgcll1Q8JZS7 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgcll1Q8JZS7 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgcll1Q8JZS7 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgcll1Q8JZS7 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgcll1Q8JZS7 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgcll1Q8JZS7 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgcll1Q8JZS7 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgcll1Q8JZS7 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgcll1Q8JZS7 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.39■□□□□ 0.05
Hmgcll1Q8JZS7 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Hmgcll1Q8JZS7 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Hmgcll1Q8JZS7 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgcll1Q8JZS7 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hmgcll1Q8JZS7 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Hmgcll1Q8JZS7 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hmgcll1Q8JZS7 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Hmgcll1Q8JZS7 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Hmgcll1Q8JZS7 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hmgcll1Q8JZS7 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Hmgcll1Q8JZS7 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hmgcll1Q8JZS7 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.38■□□□□ 0.05
Hmgcll1Q8JZS7 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC15.38■□□□□ 0.05
Hmgcll1Q8JZS7 Gm25948-201ENSMUST00000175334 112 ntBASIC15.38■□□□□ 0.05
Hmgcll1Q8JZS7 Gm38225-201ENSMUST00000194001 393 ntBASIC15.38■□□□□ 0.05
Hmgcll1Q8JZS7 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.38■□□□□ 0.05
Hmgcll1Q8JZS7 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.38■□□□□ 0.05
Hmgcll1Q8JZS7 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC15.38■□□□□ 0.05
Hmgcll1Q8JZS7 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hmgcll1Q8JZS7 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hmgcll1Q8JZS7 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hmgcll1Q8JZS7 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.38■□□□□ 0.05
Hmgcll1Q8JZS7 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
Hmgcll1Q8JZS7 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hmgcll1Q8JZS7 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Hmgcll1Q8JZS7 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
Hmgcll1Q8JZS7 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hmgcll1Q8JZS7 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms