Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rab11fip3Q8CHD8 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC19.34■□□□□ 0.69
Rab11fip3Q8CHD8 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rab11fip3Q8CHD8 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rab11fip3Q8CHD8 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Rab11fip3Q8CHD8 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Rab11fip3Q8CHD8 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rab11fip3Q8CHD8 AC154767.3-201ENSMUST00000225150 1342 ntBASIC19.33■□□□□ 0.69
Rab11fip3Q8CHD8 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rab11fip3Q8CHD8 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rab11fip3Q8CHD8 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rab11fip3Q8CHD8 Klk2-ps-201ENSMUST00000205342 571 ntBASIC19.33■□□□□ 0.68
Rab11fip3Q8CHD8 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rab11fip3Q8CHD8 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rab11fip3Q8CHD8 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rab11fip3Q8CHD8 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rab11fip3Q8CHD8 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rab11fip3Q8CHD8 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rab11fip3Q8CHD8 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC19.33■□□□□ 0.68
Rab11fip3Q8CHD8 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rab11fip3Q8CHD8 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Rab11fip3Q8CHD8 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rab11fip3Q8CHD8 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
Rab11fip3Q8CHD8 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rab11fip3Q8CHD8 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rab11fip3Q8CHD8 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rab11fip3Q8CHD8 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Rab11fip3Q8CHD8 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rab11fip3Q8CHD8 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rab11fip3Q8CHD8 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Rab11fip3Q8CHD8 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rab11fip3Q8CHD8 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rab11fip3Q8CHD8 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rab11fip3Q8CHD8 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rab11fip3Q8CHD8 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC19.32■□□□□ 0.68
Rab11fip3Q8CHD8 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rab11fip3Q8CHD8 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rab11fip3Q8CHD8 Gm5479-201ENSMUST00000160578 435 ntBASIC19.32■□□□□ 0.68
Rab11fip3Q8CHD8 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC19.32■□□□□ 0.68
Rab11fip3Q8CHD8 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rab11fip3Q8CHD8 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rab11fip3Q8CHD8 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rab11fip3Q8CHD8 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Rab11fip3Q8CHD8 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rab11fip3Q8CHD8 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Rab11fip3Q8CHD8 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC19.31■□□□□ 0.68
Rab11fip3Q8CHD8 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Rab11fip3Q8CHD8 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab11fip3Q8CHD8 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC19.31■□□□□ 0.68
Rab11fip3Q8CHD8 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab11fip3Q8CHD8 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Rab11fip3Q8CHD8 Trav13-3-201ENSMUST00000117226 336 ntBASIC19.31■□□□□ 0.68
Rab11fip3Q8CHD8 Gm6415-201ENSMUST00000118488 348 ntBASIC19.31■□□□□ 0.68
Rab11fip3Q8CHD8 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rab11fip3Q8CHD8 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC19.31■□□□□ 0.68
Rab11fip3Q8CHD8 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rab11fip3Q8CHD8 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab11fip3Q8CHD8 AC158529.1-201ENSMUST00000223618 239 ntBASIC19.31■□□□□ 0.68
Rab11fip3Q8CHD8 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab11fip3Q8CHD8 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab11fip3Q8CHD8 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab11fip3Q8CHD8 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab11fip3Q8CHD8 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab11fip3Q8CHD8 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Rab11fip3Q8CHD8 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab11fip3Q8CHD8 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Rab11fip3Q8CHD8 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab11fip3Q8CHD8 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC19.31■□□□□ 0.68
Rab11fip3Q8CHD8 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab11fip3Q8CHD8 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rab11fip3Q8CHD8 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rab11fip3Q8CHD8 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC19.3■□□□□ 0.68
Rab11fip3Q8CHD8 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Rab11fip3Q8CHD8 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC19.3■□□□□ 0.68
Rab11fip3Q8CHD8 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rab11fip3Q8CHD8 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rab11fip3Q8CHD8 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rab11fip3Q8CHD8 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rab11fip3Q8CHD8 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rab11fip3Q8CHD8 Gm13464-201ENSMUST00000119418 935 ntBASIC19.3■□□□□ 0.68
Rab11fip3Q8CHD8 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Rab11fip3Q8CHD8 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rab11fip3Q8CHD8 AC126408.1-201ENSMUST00000225184 523 ntBASIC19.3■□□□□ 0.68
Rab11fip3Q8CHD8 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rab11fip3Q8CHD8 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rab11fip3Q8CHD8 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rab11fip3Q8CHD8 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rab11fip3Q8CHD8 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rab11fip3Q8CHD8 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rab11fip3Q8CHD8 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rab11fip3Q8CHD8 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Rab11fip3Q8CHD8 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rab11fip3Q8CHD8 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rab11fip3Q8CHD8 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rab11fip3Q8CHD8 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Rab11fip3Q8CHD8 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rab11fip3Q8CHD8 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rab11fip3Q8CHD8 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rab11fip3Q8CHD8 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Rab11fip3Q8CHD8 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms