Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Sox30Q8CGW4 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sox30Q8CGW4 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sox30Q8CGW4 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sox30Q8CGW4 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sox30Q8CGW4 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sox30Q8CGW4 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sox30Q8CGW4 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Sox30Q8CGW4 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sox30Q8CGW4 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sox30Q8CGW4 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.37■□□□□ 0.21
Sox30Q8CGW4 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.37■□□□□ 0.21
Sox30Q8CGW4 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC16.37■□□□□ 0.21
Sox30Q8CGW4 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sox30Q8CGW4 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sox30Q8CGW4 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sox30Q8CGW4 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sox30Q8CGW4 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sox30Q8CGW4 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sox30Q8CGW4 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Sox30Q8CGW4 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Sox30Q8CGW4 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sox30Q8CGW4 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sox30Q8CGW4 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Sox30Q8CGW4 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Sox30Q8CGW4 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sox30Q8CGW4 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sox30Q8CGW4 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sox30Q8CGW4 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
Sox30Q8CGW4 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sox30Q8CGW4 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.36■□□□□ 0.21
Sox30Q8CGW4 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Sox30Q8CGW4 Gm6089-201ENSMUST00000197666 938 ntBASIC16.36■□□□□ 0.21
Sox30Q8CGW4 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.36■□□□□ 0.21
Sox30Q8CGW4 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.36■□□□□ 0.21
Sox30Q8CGW4 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sox30Q8CGW4 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sox30Q8CGW4 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sox30Q8CGW4 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sox30Q8CGW4 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sox30Q8CGW4 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Sox30Q8CGW4 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sox30Q8CGW4 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC16.35■□□□□ 0.21
Sox30Q8CGW4 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sox30Q8CGW4 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.35■□□□□ 0.21
Sox30Q8CGW4 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.35■□□□□ 0.21
Sox30Q8CGW4 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sox30Q8CGW4 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sox30Q8CGW4 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Sox30Q8CGW4 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sox30Q8CGW4 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sox30Q8CGW4 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Sox30Q8CGW4 Gm44357-201ENSMUST00000195897 142 ntBASIC16.35■□□□□ 0.21
Sox30Q8CGW4 Gm19658-201ENSMUST00000196231 138 ntBASIC16.35■□□□□ 0.21
Sox30Q8CGW4 Gm44367-201ENSMUST00000196836 138 ntBASIC16.35■□□□□ 0.21
Sox30Q8CGW4 Gm44350-201ENSMUST00000197197 138 ntBASIC16.35■□□□□ 0.21
Sox30Q8CGW4 Gm44390-201ENSMUST00000197533 144 ntBASIC16.35■□□□□ 0.21
Sox30Q8CGW4 Gm44313-201ENSMUST00000198018 138 ntBASIC16.35■□□□□ 0.21
Sox30Q8CGW4 Gm44486-201ENSMUST00000198508 138 ntBASIC16.35■□□□□ 0.21
Sox30Q8CGW4 Gm44314-201ENSMUST00000199263 138 ntBASIC16.35■□□□□ 0.21
Sox30Q8CGW4 Gm44394-201ENSMUST00000199558 138 ntBASIC16.35■□□□□ 0.21
Sox30Q8CGW4 Gm44484-201ENSMUST00000199873 138 ntBASIC16.35■□□□□ 0.21
Sox30Q8CGW4 Gm44466-201ENSMUST00000200264 138 ntBASIC16.35■□□□□ 0.21
Sox30Q8CGW4 Gm44359-201ENSMUST00000200671 138 ntBASIC16.35■□□□□ 0.21
Sox30Q8CGW4 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sox30Q8CGW4 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sox30Q8CGW4 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Sox30Q8CGW4 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sox30Q8CGW4 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sox30Q8CGW4 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sox30Q8CGW4 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC16.35■□□□□ 0.21
Sox30Q8CGW4 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sox30Q8CGW4 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sox30Q8CGW4 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sox30Q8CGW4 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sox30Q8CGW4 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Sox30Q8CGW4 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sox30Q8CGW4 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sox30Q8CGW4 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Sox30Q8CGW4 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sox30Q8CGW4 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sox30Q8CGW4 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Sox30Q8CGW4 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sox30Q8CGW4 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sox30Q8CGW4 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
Sox30Q8CGW4 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sox30Q8CGW4 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sox30Q8CGW4 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sox30Q8CGW4 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.34■□□□□ 0.21
Sox30Q8CGW4 Gm13418-201ENSMUST00000119097 944 ntBASIC16.34■□□□□ 0.21
Sox30Q8CGW4 Gm11764-201ENSMUST00000120221 623 ntBASIC16.34■□□□□ 0.21
Sox30Q8CGW4 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Sox30Q8CGW4 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.34■□□□□ 0.21
Sox30Q8CGW4 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Sox30Q8CGW4 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sox30Q8CGW4 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sox30Q8CGW4 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sox30Q8CGW4 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sox30Q8CGW4 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Sox30Q8CGW4 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms