Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Gm15460-201ENSMUST00000118147 391 ntBASIC15.31■□□□□ 0.04
Rp1l1Q8CGM2 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rp1l1Q8CGM2 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC15.31■□□□□ 0.04
Rp1l1Q8CGM2 Gm9726-201ENSMUST00000180321 678 ntBASIC15.31■□□□□ 0.04
Rp1l1Q8CGM2 AC153872.1-201ENSMUST00000199539 128 ntBASIC15.31■□□□□ 0.04
Rp1l1Q8CGM2 Gm44799-201ENSMUST00000207639 1202 ntBASIC15.31■□□□□ 0.04
Rp1l1Q8CGM2 Gm7446-201ENSMUST00000221035 1240 ntBASIC15.31■□□□□ 0.04
Rp1l1Q8CGM2 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rp1l1Q8CGM2 Gm8399-201ENSMUST00000082300 1117 ntBASIC15.31■□□□□ 0.04
Rp1l1Q8CGM2 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rp1l1Q8CGM2 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rp1l1Q8CGM2 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rp1l1Q8CGM2 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rp1l1Q8CGM2 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC15.31■□□□□ 0.04
Rp1l1Q8CGM2 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rp1l1Q8CGM2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rp1l1Q8CGM2 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rp1l1Q8CGM2 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rp1l1Q8CGM2 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rp1l1Q8CGM2 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rp1l1Q8CGM2 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rp1l1Q8CGM2 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rp1l1Q8CGM2 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rp1l1Q8CGM2 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rp1l1Q8CGM2 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rp1l1Q8CGM2 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rp1l1Q8CGM2 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC15.31■□□□□ 0.04
Rp1l1Q8CGM2 AC150560.1-201ENSMUST00000227731 1187 ntBASIC15.31■□□□□ 0.04
Rp1l1Q8CGM2 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.31■□□□□ 0.04
Rp1l1Q8CGM2 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rp1l1Q8CGM2 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rp1l1Q8CGM2 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rp1l1Q8CGM2 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC15.3■□□□□ 0.04
Rp1l1Q8CGM2 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC15.3■□□□□ 0.04
Rp1l1Q8CGM2 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.3■□□□□ 0.04
Rp1l1Q8CGM2 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Rp1l1Q8CGM2 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
Rp1l1Q8CGM2 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC15.3■□□□□ 0.04
Rp1l1Q8CGM2 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rp1l1Q8CGM2 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rp1l1Q8CGM2 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC15.3■□□□□ 0.04
Rp1l1Q8CGM2 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rp1l1Q8CGM2 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rp1l1Q8CGM2 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rp1l1Q8CGM2 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.3■□□□□ 0.04
Rp1l1Q8CGM2 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rp1l1Q8CGM2 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Rp1l1Q8CGM2 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rp1l1Q8CGM2 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rp1l1Q8CGM2 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rp1l1Q8CGM2 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rp1l1Q8CGM2 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rp1l1Q8CGM2 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rp1l1Q8CGM2 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rp1l1Q8CGM2 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rp1l1Q8CGM2 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC15.29■□□□□ 0.04
Rp1l1Q8CGM2 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC15.29■□□□□ 0.04
Rp1l1Q8CGM2 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Rp1l1Q8CGM2 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rp1l1Q8CGM2 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.29■□□□□ 0.04
Rp1l1Q8CGM2 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
Rp1l1Q8CGM2 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rp1l1Q8CGM2 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rp1l1Q8CGM2 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rp1l1Q8CGM2 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rp1l1Q8CGM2 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rp1l1Q8CGM2 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rp1l1Q8CGM2 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rp1l1Q8CGM2 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rp1l1Q8CGM2 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rp1l1Q8CGM2 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC15.29■□□□□ 0.04
Rp1l1Q8CGM2 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC15.29■□□□□ 0.04
Rp1l1Q8CGM2 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rp1l1Q8CGM2 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rp1l1Q8CGM2 Gm10275-202ENSMUST00000168697 495 ntBASIC15.29■□□□□ 0.04
Rp1l1Q8CGM2 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC15.29■□□□□ 0.04
Rp1l1Q8CGM2 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC15.29■□□□□ 0.04
Rp1l1Q8CGM2 AC122459.1-201ENSMUST00000228373 885 ntBASIC15.29■□□□□ 0.04
Rp1l1Q8CGM2 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rp1l1Q8CGM2 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rp1l1Q8CGM2 Gm10275-201ENSMUST00000092620 635 ntBASIC15.29■□□□□ 0.04
Rp1l1Q8CGM2 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rp1l1Q8CGM2 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rp1l1Q8CGM2 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rp1l1Q8CGM2 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rp1l1Q8CGM2 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rp1l1Q8CGM2 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rp1l1Q8CGM2 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rp1l1Q8CGM2 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rp1l1Q8CGM2 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Rp1l1Q8CGM2 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rp1l1Q8CGM2 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rp1l1Q8CGM2 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rp1l1Q8CGM2 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rp1l1Q8CGM2 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rp1l1Q8CGM2 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC15.28■□□□□ 0.04
Rp1l1Q8CGM2 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rp1l1Q8CGM2 AC110817.1-201ENSMUST00000225706 605 ntBASIC15.28■□□□□ 0.04
Rp1l1Q8CGM2 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rp1l1Q8CGM2 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms