Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc38Q8CDN8 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ccdc38Q8CDN8 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc38Q8CDN8 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc38Q8CDN8 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc38Q8CDN8 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc38Q8CDN8 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc38Q8CDN8 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc38Q8CDN8 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc38Q8CDN8 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc38Q8CDN8 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc38Q8CDN8 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc38Q8CDN8 Gm7862-201ENSMUST00000121461 292 ntBASIC16.65■□□□□ 0.26
Ccdc38Q8CDN8 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ccdc38Q8CDN8 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc38Q8CDN8 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ccdc38Q8CDN8 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc38Q8CDN8 Mypopos-202ENSMUST00000205975 2321 ntBASIC16.65■□□□□ 0.26
Ccdc38Q8CDN8 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc38Q8CDN8 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc38Q8CDN8 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc38Q8CDN8 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc38Q8CDN8 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc38Q8CDN8 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc38Q8CDN8 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc38Q8CDN8 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Ccdc38Q8CDN8 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc38Q8CDN8 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.64■□□□□ 0.25
Ccdc38Q8CDN8 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc38Q8CDN8 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc38Q8CDN8 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.64■□□□□ 0.25
Ccdc38Q8CDN8 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc38Q8CDN8 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Ccdc38Q8CDN8 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc38Q8CDN8 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc38Q8CDN8 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Ccdc38Q8CDN8 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc38Q8CDN8 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc38Q8CDN8 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc38Q8CDN8 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
Ccdc38Q8CDN8 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc38Q8CDN8 Gm6550-201ENSMUST00000187574 993 ntBASIC16.64■□□□□ 0.25
Ccdc38Q8CDN8 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.64■□□□□ 0.25
Ccdc38Q8CDN8 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc38Q8CDN8 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.64■□□□□ 0.25
Ccdc38Q8CDN8 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc38Q8CDN8 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc38Q8CDN8 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc38Q8CDN8 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc38Q8CDN8 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc38Q8CDN8 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.64■□□□□ 0.25
Ccdc38Q8CDN8 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Ccdc38Q8CDN8 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc38Q8CDN8 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc38Q8CDN8 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc38Q8CDN8 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc38Q8CDN8 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc38Q8CDN8 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ccdc38Q8CDN8 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc38Q8CDN8 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc38Q8CDN8 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc38Q8CDN8 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc38Q8CDN8 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc38Q8CDN8 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc38Q8CDN8 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.63■□□□□ 0.25
Ccdc38Q8CDN8 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc38Q8CDN8 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc38Q8CDN8 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc38Q8CDN8 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc38Q8CDN8 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc38Q8CDN8 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc38Q8CDN8 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc38Q8CDN8 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc38Q8CDN8 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc38Q8CDN8 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc38Q8CDN8 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.63■□□□□ 0.25
Ccdc38Q8CDN8 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc38Q8CDN8 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Ccdc38Q8CDN8 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc38Q8CDN8 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc38Q8CDN8 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc38Q8CDN8 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc38Q8CDN8 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc38Q8CDN8 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc38Q8CDN8 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc38Q8CDN8 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc38Q8CDN8 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc38Q8CDN8 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc38Q8CDN8 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc38Q8CDN8 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.62■□□□□ 0.25
Ccdc38Q8CDN8 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc38Q8CDN8 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc38Q8CDN8 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc38Q8CDN8 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Ccdc38Q8CDN8 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc38Q8CDN8 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.62■□□□□ 0.25
Ccdc38Q8CDN8 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC16.62■□□□□ 0.25
Ccdc38Q8CDN8 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ccdc38Q8CDN8 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc38Q8CDN8 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms