Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Gm9856-201ENSMUST00000217077 2578 ntBASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Vcpip1Q8CDG3 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vcpip1Q8CDG3 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vcpip1Q8CDG3 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vcpip1Q8CDG3 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.11■□□□□ 0.17
Vcpip1Q8CDG3 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
Vcpip1Q8CDG3 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Vcpip1Q8CDG3 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.11■□□□□ 0.17
Vcpip1Q8CDG3 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.11■□□□□ 0.17
Vcpip1Q8CDG3 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.11■□□□□ 0.17
Vcpip1Q8CDG3 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vcpip1Q8CDG3 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.11■□□□□ 0.17
Vcpip1Q8CDG3 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vcpip1Q8CDG3 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vcpip1Q8CDG3 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vcpip1Q8CDG3 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vcpip1Q8CDG3 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vcpip1Q8CDG3 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vcpip1Q8CDG3 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vcpip1Q8CDG3 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Vcpip1Q8CDG3 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vcpip1Q8CDG3 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vcpip1Q8CDG3 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vcpip1Q8CDG3 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Vcpip1Q8CDG3 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vcpip1Q8CDG3 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.1■□□□□ 0.17
Vcpip1Q8CDG3 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vcpip1Q8CDG3 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vcpip1Q8CDG3 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vcpip1Q8CDG3 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vcpip1Q8CDG3 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vcpip1Q8CDG3 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vcpip1Q8CDG3 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.1■□□□□ 0.17
Vcpip1Q8CDG3 Gm13418-201ENSMUST00000119097 944 ntBASIC16.1■□□□□ 0.17
Vcpip1Q8CDG3 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vcpip1Q8CDG3 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Vcpip1Q8CDG3 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.1■□□□□ 0.17
Vcpip1Q8CDG3 Gm6089-201ENSMUST00000197666 938 ntBASIC16.1■□□□□ 0.17
Vcpip1Q8CDG3 Gm2651-201ENSMUST00000203560 838 ntBASIC16.1■□□□□ 0.17
Vcpip1Q8CDG3 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vcpip1Q8CDG3 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.1■□□□□ 0.17
Vcpip1Q8CDG3 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vcpip1Q8CDG3 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vcpip1Q8CDG3 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Vcpip1Q8CDG3 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vcpip1Q8CDG3 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vcpip1Q8CDG3 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vcpip1Q8CDG3 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vcpip1Q8CDG3 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vcpip1Q8CDG3 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Vcpip1Q8CDG3 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vcpip1Q8CDG3 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vcpip1Q8CDG3 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vcpip1Q8CDG3 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vcpip1Q8CDG3 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Vcpip1Q8CDG3 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Vcpip1Q8CDG3 Nupl1-207ENSMUST00000225311 2475 ntBASIC16.09■□□□□ 0.17
Vcpip1Q8CDG3 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vcpip1Q8CDG3 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Vcpip1Q8CDG3 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vcpip1Q8CDG3 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Vcpip1Q8CDG3 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vcpip1Q8CDG3 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Vcpip1Q8CDG3 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.09■□□□□ 0.17
Vcpip1Q8CDG3 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vcpip1Q8CDG3 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Vcpip1Q8CDG3 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Vcpip1Q8CDG3 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vcpip1Q8CDG3 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vcpip1Q8CDG3 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.09■□□□□ 0.17
Vcpip1Q8CDG3 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vcpip1Q8CDG3 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vcpip1Q8CDG3 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Vcpip1Q8CDG3 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vcpip1Q8CDG3 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.09■□□□□ 0.17
Vcpip1Q8CDG3 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms