Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Prpf31Q8CCF0 Gm43767-201ENSMUST00000198933 381 ntBASIC16.37■□□□□ 0.21
Prpf31Q8CCF0 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.37■□□□□ 0.21
Prpf31Q8CCF0 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf31Q8CCF0 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.37■□□□□ 0.21
Prpf31Q8CCF0 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf31Q8CCF0 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
Prpf31Q8CCF0 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf31Q8CCF0 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf31Q8CCF0 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf31Q8CCF0 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf31Q8CCF0 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf31Q8CCF0 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Prpf31Q8CCF0 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf31Q8CCF0 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf31Q8CCF0 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf31Q8CCF0 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf31Q8CCF0 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf31Q8CCF0 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf31Q8CCF0 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Prpf31Q8CCF0 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Prpf31Q8CCF0 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.36■□□□□ 0.21
Prpf31Q8CCF0 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.36■□□□□ 0.21
Prpf31Q8CCF0 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.36■□□□□ 0.21
Prpf31Q8CCF0 Gm18057-201ENSMUST00000208220 503 ntBASIC16.36■□□□□ 0.21
Prpf31Q8CCF0 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC16.36■□□□□ 0.21
Prpf31Q8CCF0 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf31Q8CCF0 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf31Q8CCF0 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.36■□□□□ 0.21
Prpf31Q8CCF0 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Prpf31Q8CCF0 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf31Q8CCF0 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.36■□□□□ 0.21
Prpf31Q8CCF0 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf31Q8CCF0 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Prpf31Q8CCF0 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf31Q8CCF0 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Prpf31Q8CCF0 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf31Q8CCF0 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf31Q8CCF0 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Prpf31Q8CCF0 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Prpf31Q8CCF0 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.35■□□□□ 0.21
Prpf31Q8CCF0 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Prpf31Q8CCF0 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.35■□□□□ 0.21
Prpf31Q8CCF0 Gm25925-201ENSMUST00000158314 306 ntBASIC16.35■□□□□ 0.21
Prpf31Q8CCF0 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Prpf31Q8CCF0 Mir6990-201ENSMUST00000183724 91 ntBASIC16.35■□□□□ 0.21
Prpf31Q8CCF0 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.35■□□□□ 0.21
Prpf31Q8CCF0 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Prpf31Q8CCF0 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Prpf31Q8CCF0 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Prpf31Q8CCF0 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Prpf31Q8CCF0 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
Prpf31Q8CCF0 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Prpf31Q8CCF0 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.35■□□□□ 0.21
Prpf31Q8CCF0 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.34■□□□□ 0.21
Prpf31Q8CCF0 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf31Q8CCF0 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf31Q8CCF0 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf31Q8CCF0 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.34■□□□□ 0.21
Prpf31Q8CCF0 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf31Q8CCF0 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.34■□□□□ 0.21
Prpf31Q8CCF0 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf31Q8CCF0 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf31Q8CCF0 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.34■□□□□ 0.21
Prpf31Q8CCF0 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Prpf31Q8CCF0 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Prpf31Q8CCF0 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf31Q8CCF0 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Prpf31Q8CCF0 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf31Q8CCF0 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf31Q8CCF0 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf31Q8CCF0 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf31Q8CCF0 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf31Q8CCF0 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf31Q8CCF0 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf31Q8CCF0 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf31Q8CCF0 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf31Q8CCF0 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf31Q8CCF0 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Prpf31Q8CCF0 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
Prpf31Q8CCF0 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Prpf31Q8CCF0 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Prpf31Q8CCF0 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Prpf31Q8CCF0 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Prpf31Q8CCF0 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Prpf31Q8CCF0 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Prpf31Q8CCF0 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf31Q8CCF0 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Prpf31Q8CCF0 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf31Q8CCF0 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf31Q8CCF0 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Prpf31Q8CCF0 Gm6973-201ENSMUST00000117080 721 ntBASIC16.33■□□□□ 0.2
Prpf31Q8CCF0 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf31Q8CCF0 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.33■□□□□ 0.2
Prpf31Q8CCF0 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.33■□□□□ 0.2
Prpf31Q8CCF0 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.33■□□□□ 0.2
Prpf31Q8CCF0 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC16.33■□□□□ 0.2
Prpf31Q8CCF0 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf31Q8CCF0 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.33■□□□□ 0.2
Prpf31Q8CCF0 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms