Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps53Q8CCB4 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps53Q8CCB4 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps53Q8CCB4 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Vps53Q8CCB4 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Vps53Q8CCB4 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps53Q8CCB4 Gm38042-201ENSMUST00000191614 5208 ntBASIC17.44■□□□□ 0.38
Vps53Q8CCB4 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Vps53Q8CCB4 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Vps53Q8CCB4 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps53Q8CCB4 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps53Q8CCB4 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps53Q8CCB4 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Vps53Q8CCB4 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps53Q8CCB4 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Vps53Q8CCB4 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC17.43■□□□□ 0.38
Vps53Q8CCB4 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Vps53Q8CCB4 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.43■□□□□ 0.38
Vps53Q8CCB4 Gm37153-201ENSMUST00000193637 231 ntBASIC17.43■□□□□ 0.38
Vps53Q8CCB4 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.43■□□□□ 0.38
Vps53Q8CCB4 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Vps53Q8CCB4 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Vps53Q8CCB4 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Vps53Q8CCB4 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Vps53Q8CCB4 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.43■□□□□ 0.38
Vps53Q8CCB4 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps53Q8CCB4 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps53Q8CCB4 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Vps53Q8CCB4 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps53Q8CCB4 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Vps53Q8CCB4 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps53Q8CCB4 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps53Q8CCB4 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps53Q8CCB4 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps53Q8CCB4 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps53Q8CCB4 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Vps53Q8CCB4 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps53Q8CCB4 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.42■□□□□ 0.38
Vps53Q8CCB4 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Vps53Q8CCB4 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps53Q8CCB4 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vps53Q8CCB4 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Vps53Q8CCB4 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps53Q8CCB4 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps53Q8CCB4 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps53Q8CCB4 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps53Q8CCB4 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.42■□□□□ 0.38
Vps53Q8CCB4 Gm45167-201ENSMUST00000208007 322 ntBASIC17.42■□□□□ 0.38
Vps53Q8CCB4 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps53Q8CCB4 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps53Q8CCB4 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps53Q8CCB4 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.42■□□□□ 0.38
Vps53Q8CCB4 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vps53Q8CCB4 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vps53Q8CCB4 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps53Q8CCB4 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps53Q8CCB4 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps53Q8CCB4 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps53Q8CCB4 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps53Q8CCB4 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps53Q8CCB4 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps53Q8CCB4 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps53Q8CCB4 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps53Q8CCB4 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps53Q8CCB4 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps53Q8CCB4 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Vps53Q8CCB4 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Vps53Q8CCB4 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Vps53Q8CCB4 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Vps53Q8CCB4 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.41■□□□□ 0.38
Vps53Q8CCB4 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps53Q8CCB4 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.41■□□□□ 0.38
Vps53Q8CCB4 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps53Q8CCB4 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Vps53Q8CCB4 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps53Q8CCB4 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps53Q8CCB4 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps53Q8CCB4 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps53Q8CCB4 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Vps53Q8CCB4 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps53Q8CCB4 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps53Q8CCB4 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Vps53Q8CCB4 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.4■□□□□ 0.38
Vps53Q8CCB4 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC17.4■□□□□ 0.38
Vps53Q8CCB4 Gm14701-201ENSMUST00000117156 348 ntBASIC17.4■□□□□ 0.38
Vps53Q8CCB4 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.4■□□□□ 0.38
Vps53Q8CCB4 Gm27300-201ENSMUST00000184085 97 ntBASIC17.4■□□□□ 0.38
Vps53Q8CCB4 Gm27335-201ENSMUST00000184758 97 ntBASIC17.4■□□□□ 0.38
Vps53Q8CCB4 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Vps53Q8CCB4 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps53Q8CCB4 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps53Q8CCB4 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps53Q8CCB4 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps53Q8CCB4 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps53Q8CCB4 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps53Q8CCB4 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps53Q8CCB4 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps53Q8CCB4 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps53Q8CCB4 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps53Q8CCB4 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms