Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps9d1Q8C190 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps9d1Q8C190 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps9d1Q8C190 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
Vps9d1Q8C190 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Vps9d1Q8C190 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Vps9d1Q8C190 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.04□□□□□ -0.16
Vps9d1Q8C190 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vps9d1Q8C190 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps9d1Q8C190 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.04□□□□□ -0.16
Vps9d1Q8C190 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.04□□□□□ -0.16
Vps9d1Q8C190 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps9d1Q8C190 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps9d1Q8C190 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Vps9d1Q8C190 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps9d1Q8C190 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps9d1Q8C190 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps9d1Q8C190 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps9d1Q8C190 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps9d1Q8C190 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.04□□□□□ -0.16
Vps9d1Q8C190 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.04□□□□□ -0.16
Vps9d1Q8C190 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps9d1Q8C190 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Vps9d1Q8C190 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vps9d1Q8C190 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.03□□□□□ -0.16
Vps9d1Q8C190 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps9d1Q8C190 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps9d1Q8C190 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.03□□□□□ -0.16
Vps9d1Q8C190 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps9d1Q8C190 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Vps9d1Q8C190 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps9d1Q8C190 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Vps9d1Q8C190 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps9d1Q8C190 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vps9d1Q8C190 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps9d1Q8C190 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps9d1Q8C190 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vps9d1Q8C190 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.03□□□□□ -0.16
Vps9d1Q8C190 Gm12134-201ENSMUST00000122109 520 ntBASIC14.03□□□□□ -0.16
Vps9d1Q8C190 Gm27459-201ENSMUST00000184860 107 ntBASIC14.03□□□□□ -0.16
Vps9d1Q8C190 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.03□□□□□ -0.16
Vps9d1Q8C190 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.03□□□□□ -0.16
Vps9d1Q8C190 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps9d1Q8C190 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps9d1Q8C190 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vps9d1Q8C190 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps9d1Q8C190 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vps9d1Q8C190 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps9d1Q8C190 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps9d1Q8C190 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps9d1Q8C190 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps9d1Q8C190 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vps9d1Q8C190 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps9d1Q8C190 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps9d1Q8C190 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps9d1Q8C190 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vps9d1Q8C190 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vps9d1Q8C190 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps9d1Q8C190 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps9d1Q8C190 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps9d1Q8C190 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps9d1Q8C190 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Vps9d1Q8C190 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps9d1Q8C190 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps9d1Q8C190 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps9d1Q8C190 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps9d1Q8C190 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps9d1Q8C190 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps9d1Q8C190 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.02□□□□□ -0.17
Vps9d1Q8C190 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps9d1Q8C190 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps9d1Q8C190 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vps9d1Q8C190 Gm8344-201ENSMUST00000119813 856 ntBASIC14.02□□□□□ -0.17
Vps9d1Q8C190 Gm43347-201ENSMUST00000200226 580 ntBASIC14.02□□□□□ -0.17
Vps9d1Q8C190 Mzt1-203ENSMUST00000227948 952 ntBASIC14.02□□□□□ -0.17
Vps9d1Q8C190 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Vps9d1Q8C190 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps9d1Q8C190 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps9d1Q8C190 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.02□□□□□ -0.17
Vps9d1Q8C190 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Vps9d1Q8C190 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps9d1Q8C190 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps9d1Q8C190 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps9d1Q8C190 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Vps9d1Q8C190 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vps9d1Q8C190 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Vps9d1Q8C190 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps9d1Q8C190 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps9d1Q8C190 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps9d1Q8C190 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Vps9d1Q8C190 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps9d1Q8C190 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Vps9d1Q8C190 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Vps9d1Q8C190 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vps9d1Q8C190 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps9d1Q8C190 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.01□□□□□ -0.17
Vps9d1Q8C190 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vps9d1Q8C190 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vps9d1Q8C190 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Vps9d1Q8C190 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms