Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Sh3rf3Q8C120 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3rf3Q8C120 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3rf3Q8C120 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3rf3Q8C120 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3rf3Q8C120 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3rf3Q8C120 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3rf3Q8C120 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.62■□□□□ 0.09
Sh3rf3Q8C120 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3rf3Q8C120 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3rf3Q8C120 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3rf3Q8C120 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3rf3Q8C120 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.61■□□□□ 0.09
Sh3rf3Q8C120 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.61■□□□□ 0.09
Sh3rf3Q8C120 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3rf3Q8C120 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Sh3rf3Q8C120 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.61■□□□□ 0.09
Sh3rf3Q8C120 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3rf3Q8C120 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.61■□□□□ 0.09
Sh3rf3Q8C120 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.61■□□□□ 0.09
Sh3rf3Q8C120 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3rf3Q8C120 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3rf3Q8C120 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3rf3Q8C120 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.61■□□□□ 0.09
Sh3rf3Q8C120 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.61■□□□□ 0.09
Sh3rf3Q8C120 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3rf3Q8C120 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3rf3Q8C120 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3rf3Q8C120 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3rf3Q8C120 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3rf3Q8C120 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3rf3Q8C120 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3rf3Q8C120 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3rf3Q8C120 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3rf3Q8C120 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3rf3Q8C120 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.6■□□□□ 0.09
Sh3rf3Q8C120 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf3Q8C120 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf3Q8C120 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf3Q8C120 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf3Q8C120 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf3Q8C120 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf3Q8C120 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf3Q8C120 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf3Q8C120 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf3Q8C120 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf3Q8C120 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf3Q8C120 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.6■□□□□ 0.09
Sh3rf3Q8C120 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.6■□□□□ 0.09
Sh3rf3Q8C120 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf3Q8C120 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.6■□□□□ 0.09
Sh3rf3Q8C120 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.6■□□□□ 0.09
Sh3rf3Q8C120 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf3Q8C120 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf3Q8C120 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf3Q8C120 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf3Q8C120 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.6■□□□□ 0.09
Sh3rf3Q8C120 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf3Q8C120 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf3Q8C120 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf3Q8C120 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Sh3rf3Q8C120 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf3Q8C120 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf3Q8C120 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.6■□□□□ 0.09
Sh3rf3Q8C120 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.6■□□□□ 0.09
Sh3rf3Q8C120 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf3Q8C120 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf3Q8C120 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.6■□□□□ 0.09
Sh3rf3Q8C120 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf3Q8C120 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Sh3rf3Q8C120 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf3Q8C120 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf3Q8C120 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf3Q8C120 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Sh3rf3Q8C120 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3rf3Q8C120 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.59■□□□□ 0.09
Sh3rf3Q8C120 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3rf3Q8C120 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3rf3Q8C120 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3rf3Q8C120 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3rf3Q8C120 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.59■□□□□ 0.09
Sh3rf3Q8C120 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3rf3Q8C120 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3rf3Q8C120 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3rf3Q8C120 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3rf3Q8C120 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3rf3Q8C120 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3rf3Q8C120 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3rf3Q8C120 Gm13597-201ENSMUST00000121239 375 ntBASIC15.59■□□□□ 0.09
Sh3rf3Q8C120 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3rf3Q8C120 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3rf3Q8C120 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3rf3Q8C120 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.59■□□□□ 0.09
Sh3rf3Q8C120 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.59■□□□□ 0.09
Sh3rf3Q8C120 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3rf3Q8C120 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3rf3Q8C120 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Sh3rf3Q8C120 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.59■□□□□ 0.09
Sh3rf3Q8C120 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Sh3rf3Q8C120 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms