Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.82■□□□□ 0.12
Trerf1Q8BXJ2 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.82■□□□□ 0.12
Trerf1Q8BXJ2 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Trerf1Q8BXJ2 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trerf1Q8BXJ2 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.82■□□□□ 0.12
Trerf1Q8BXJ2 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trerf1Q8BXJ2 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.82■□□□□ 0.12
Trerf1Q8BXJ2 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Trerf1Q8BXJ2 Gm15173-201ENSMUST00000122049 433 ntBASIC15.82■□□□□ 0.12
Trerf1Q8BXJ2 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.82■□□□□ 0.12
Trerf1Q8BXJ2 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trerf1Q8BXJ2 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.82■□□□□ 0.12
Trerf1Q8BXJ2 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.82■□□□□ 0.12
Trerf1Q8BXJ2 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trerf1Q8BXJ2 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.82■□□□□ 0.12
Trerf1Q8BXJ2 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trerf1Q8BXJ2 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trerf1Q8BXJ2 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trerf1Q8BXJ2 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trerf1Q8BXJ2 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trerf1Q8BXJ2 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trerf1Q8BXJ2 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trerf1Q8BXJ2 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trerf1Q8BXJ2 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.82■□□□□ 0.12
Trerf1Q8BXJ2 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trerf1Q8BXJ2 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trerf1Q8BXJ2 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
Trerf1Q8BXJ2 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trerf1Q8BXJ2 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trerf1Q8BXJ2 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trerf1Q8BXJ2 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.81■□□□□ 0.12
Trerf1Q8BXJ2 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trerf1Q8BXJ2 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trerf1Q8BXJ2 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trerf1Q8BXJ2 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Trerf1Q8BXJ2 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trerf1Q8BXJ2 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Trerf1Q8BXJ2 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trerf1Q8BXJ2 Gm15358-201ENSMUST00000119249 520 ntBASIC15.81■□□□□ 0.12
Trerf1Q8BXJ2 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trerf1Q8BXJ2 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trerf1Q8BXJ2 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.81■□□□□ 0.12
Trerf1Q8BXJ2 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.81■□□□□ 0.12
Trerf1Q8BXJ2 Gm6443-201ENSMUST00000203599 874 ntBASIC15.81■□□□□ 0.12
Trerf1Q8BXJ2 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trerf1Q8BXJ2 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trerf1Q8BXJ2 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trerf1Q8BXJ2 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trerf1Q8BXJ2 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trerf1Q8BXJ2 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trerf1Q8BXJ2 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trerf1Q8BXJ2 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trerf1Q8BXJ2 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trerf1Q8BXJ2 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trerf1Q8BXJ2 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trerf1Q8BXJ2 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trerf1Q8BXJ2 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trerf1Q8BXJ2 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trerf1Q8BXJ2 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trerf1Q8BXJ2 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trerf1Q8BXJ2 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trerf1Q8BXJ2 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trerf1Q8BXJ2 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trerf1Q8BXJ2 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trerf1Q8BXJ2 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trerf1Q8BXJ2 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trerf1Q8BXJ2 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trerf1Q8BXJ2 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trerf1Q8BXJ2 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trerf1Q8BXJ2 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.8■□□□□ 0.12
Trerf1Q8BXJ2 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.8■□□□□ 0.12
Trerf1Q8BXJ2 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trerf1Q8BXJ2 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.8■□□□□ 0.12
Trerf1Q8BXJ2 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trerf1Q8BXJ2 Gm12350-201ENSMUST00000121208 462 ntBASIC15.8■□□□□ 0.12
Trerf1Q8BXJ2 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trerf1Q8BXJ2 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trerf1Q8BXJ2 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trerf1Q8BXJ2 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trerf1Q8BXJ2 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trerf1Q8BXJ2 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trerf1Q8BXJ2 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trerf1Q8BXJ2 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trerf1Q8BXJ2 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trerf1Q8BXJ2 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trerf1Q8BXJ2 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trerf1Q8BXJ2 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Trerf1Q8BXJ2 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trerf1Q8BXJ2 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trerf1Q8BXJ2 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.8■□□□□ 0.12
Trerf1Q8BXJ2 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trerf1Q8BXJ2 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.79■□□□□ 0.12
Trerf1Q8BXJ2 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trerf1Q8BXJ2 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trerf1Q8BXJ2 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trerf1Q8BXJ2 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trerf1Q8BXJ2 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trerf1Q8BXJ2 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trerf1Q8BXJ2 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Trerf1Q8BXJ2 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms