Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SprnQ8BWU1 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SprnQ8BWU1 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SprnQ8BWU1 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SprnQ8BWU1 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SprnQ8BWU1 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
SprnQ8BWU1 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SprnQ8BWU1 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SprnQ8BWU1 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SprnQ8BWU1 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SprnQ8BWU1 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SprnQ8BWU1 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SprnQ8BWU1 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SprnQ8BWU1 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SprnQ8BWU1 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SprnQ8BWU1 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
SprnQ8BWU1 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SprnQ8BWU1 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SprnQ8BWU1 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SprnQ8BWU1 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SprnQ8BWU1 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SprnQ8BWU1 Gm12895-201ENSMUST00000122214 226 ntBASIC13.23□□□□□ -0.29
SprnQ8BWU1 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.23□□□□□ -0.29
SprnQ8BWU1 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
SprnQ8BWU1 Birc2-201ENSMUST00000054878 378 ntBASIC13.23□□□□□ -0.29
SprnQ8BWU1 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SprnQ8BWU1 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SprnQ8BWU1 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.23□□□□□ -0.29
SprnQ8BWU1 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SprnQ8BWU1 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.23□□□□□ -0.29
SprnQ8BWU1 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.23□□□□□ -0.29
SprnQ8BWU1 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SprnQ8BWU1 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SprnQ8BWU1 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.23□□□□□ -0.29
SprnQ8BWU1 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.23□□□□□ -0.29
SprnQ8BWU1 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SprnQ8BWU1 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SprnQ8BWU1 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SprnQ8BWU1 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
SprnQ8BWU1 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.23□□□□□ -0.29
SprnQ8BWU1 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SprnQ8BWU1 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.22□□□□□ -0.29
SprnQ8BWU1 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
SprnQ8BWU1 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SprnQ8BWU1 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SprnQ8BWU1 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SprnQ8BWU1 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
SprnQ8BWU1 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.22□□□□□ -0.29
SprnQ8BWU1 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SprnQ8BWU1 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SprnQ8BWU1 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.22□□□□□ -0.29
SprnQ8BWU1 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SprnQ8BWU1 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SprnQ8BWU1 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SprnQ8BWU1 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SprnQ8BWU1 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.22□□□□□ -0.29
SprnQ8BWU1 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
SprnQ8BWU1 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
SprnQ8BWU1 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
SprnQ8BWU1 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.22□□□□□ -0.29
SprnQ8BWU1 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.22□□□□□ -0.29
SprnQ8BWU1 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
SprnQ8BWU1 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SprnQ8BWU1 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SprnQ8BWU1 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SprnQ8BWU1 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SprnQ8BWU1 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SprnQ8BWU1 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.22□□□□□ -0.29
SprnQ8BWU1 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SprnQ8BWU1 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SprnQ8BWU1 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SprnQ8BWU1 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SprnQ8BWU1 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.21□□□□□ -0.29
SprnQ8BWU1 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SprnQ8BWU1 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.21□□□□□ -0.29
SprnQ8BWU1 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.21□□□□□ -0.29
SprnQ8BWU1 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
SprnQ8BWU1 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.29
SprnQ8BWU1 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SprnQ8BWU1 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.21□□□□□ -0.29
SprnQ8BWU1 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SprnQ8BWU1 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SprnQ8BWU1 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
SprnQ8BWU1 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SprnQ8BWU1 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SprnQ8BWU1 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
SprnQ8BWU1 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SprnQ8BWU1 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SprnQ8BWU1 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SprnQ8BWU1 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SprnQ8BWU1 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
SprnQ8BWU1 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
SprnQ8BWU1 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
SprnQ8BWU1 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.21□□□□□ -0.29
SprnQ8BWU1 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SprnQ8BWU1 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SprnQ8BWU1 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SprnQ8BWU1 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.21□□□□□ -0.29
SprnQ8BWU1 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.21□□□□□ -0.29
SprnQ8BWU1 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms