Protein–RNA interactions for Protein: Q8BR37

Nhlrc1, E3 ubiquitin-protein ligase NHLRC1, mousemouse

Predictions only

Length 401 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1Q8BR37 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nhlrc1Q8BR37 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nhlrc1Q8BR37 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nhlrc1Q8BR37 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nhlrc1Q8BR37 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC11.65□□□□□ -0.54
Nhlrc1Q8BR37 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nhlrc1Q8BR37 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nhlrc1Q8BR37 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nhlrc1Q8BR37 Prkcz2-201ENSMUST00000206136 1756 ntBASIC11.65□□□□□ -0.54
Nhlrc1Q8BR37 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nhlrc1Q8BR37 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nhlrc1Q8BR37 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC11.65□□□□□ -0.54
Nhlrc1Q8BR37 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nhlrc1Q8BR37 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC11.65□□□□□ -0.54
Nhlrc1Q8BR37 AC160980.1-201ENSMUST00000224136 970 ntBASIC11.65□□□□□ -0.54
Nhlrc1Q8BR37 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Nhlrc1Q8BR37 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nhlrc1Q8BR37 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nhlrc1Q8BR37 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC11.65□□□□□ -0.54
Nhlrc1Q8BR37 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Nhlrc1Q8BR37 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nhlrc1Q8BR37 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nhlrc1Q8BR37 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nhlrc1Q8BR37 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.65□□□□□ -0.54
Nhlrc1Q8BR37 Gm5184-201ENSMUST00000220417 1702 ntBASIC11.65□□□□□ -0.54
Nhlrc1Q8BR37 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nhlrc1Q8BR37 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nhlrc1Q8BR37 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nhlrc1Q8BR37 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Nhlrc1Q8BR37 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Nhlrc1Q8BR37 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Nhlrc1Q8BR37 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Nhlrc1Q8BR37 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nhlrc1Q8BR37 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nhlrc1Q8BR37 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Nhlrc1Q8BR37 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC11.64□□□□□ -0.55
Nhlrc1Q8BR37 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Nhlrc1Q8BR37 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nhlrc1Q8BR37 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Nhlrc1Q8BR37 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nhlrc1Q8BR37 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nhlrc1Q8BR37 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC11.64□□□□□ -0.55
Nhlrc1Q8BR37 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nhlrc1Q8BR37 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
Nhlrc1Q8BR37 Gm7901-201ENSMUST00000120430 1597 ntBASIC11.64□□□□□ -0.55
Nhlrc1Q8BR37 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nhlrc1Q8BR37 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC11.64□□□□□ -0.55
Nhlrc1Q8BR37 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nhlrc1Q8BR37 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC11.64□□□□□ -0.55
Nhlrc1Q8BR37 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC11.64□□□□□ -0.55
Nhlrc1Q8BR37 Auts2-212ENSMUST00000178555 309 ntBASIC11.64□□□□□ -0.55
Nhlrc1Q8BR37 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nhlrc1Q8BR37 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nhlrc1Q8BR37 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
Nhlrc1Q8BR37 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nhlrc1Q8BR37 Gpr146-202ENSMUST00000053120 1040 ntBASIC11.64□□□□□ -0.55
Nhlrc1Q8BR37 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nhlrc1Q8BR37 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nhlrc1Q8BR37 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nhlrc1Q8BR37 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Nhlrc1Q8BR37 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nhlrc1Q8BR37 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Nhlrc1Q8BR37 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nhlrc1Q8BR37 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nhlrc1Q8BR37 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nhlrc1Q8BR37 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Nhlrc1Q8BR37 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nhlrc1Q8BR37 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nhlrc1Q8BR37 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nhlrc1Q8BR37 Gm13337-201ENSMUST00000119183 1594 ntBASIC11.63□□□□□ -0.55
Nhlrc1Q8BR37 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nhlrc1Q8BR37 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nhlrc1Q8BR37 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nhlrc1Q8BR37 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nhlrc1Q8BR37 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nhlrc1Q8BR37 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nhlrc1Q8BR37 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nhlrc1Q8BR37 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nhlrc1Q8BR37 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nhlrc1Q8BR37 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC11.63□□□□□ -0.55
Nhlrc1Q8BR37 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nhlrc1Q8BR37 Gm6226-201ENSMUST00000117765 1146 ntBASIC11.63□□□□□ -0.55
Nhlrc1Q8BR37 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nhlrc1Q8BR37 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Nhlrc1Q8BR37 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Nhlrc1Q8BR37 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC11.63□□□□□ -0.55
Nhlrc1Q8BR37 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC11.63□□□□□ -0.55
Nhlrc1Q8BR37 Gm5628-201ENSMUST00000222318 1049 ntBASIC11.63□□□□□ -0.55
Nhlrc1Q8BR37 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC11.63□□□□□ -0.55
Nhlrc1Q8BR37 AC155252.2-201ENSMUST00000226946 680 ntBASIC11.63□□□□□ -0.55
Nhlrc1Q8BR37 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nhlrc1Q8BR37 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Nhlrc1Q8BR37 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nhlrc1Q8BR37 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nhlrc1Q8BR37 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nhlrc1Q8BR37 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nhlrc1Q8BR37 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nhlrc1Q8BR37 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nhlrc1Q8BR37 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nhlrc1Q8BR37 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms