Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SynbQ8BI41 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
SynbQ8BI41 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SynbQ8BI41 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
SynbQ8BI41 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SynbQ8BI41 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SynbQ8BI41 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SynbQ8BI41 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SynbQ8BI41 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
SynbQ8BI41 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SynbQ8BI41 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.33□□□□□ -0.12
SynbQ8BI41 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SynbQ8BI41 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SynbQ8BI41 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SynbQ8BI41 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SynbQ8BI41 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SynbQ8BI41 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SynbQ8BI41 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SynbQ8BI41 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
SynbQ8BI41 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SynbQ8BI41 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SynbQ8BI41 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SynbQ8BI41 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SynbQ8BI41 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SynbQ8BI41 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SynbQ8BI41 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SynbQ8BI41 Gm15427-201ENSMUST00000117288 531 ntBASIC14.32□□□□□ -0.12
SynbQ8BI41 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.32□□□□□ -0.12
SynbQ8BI41 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SynbQ8BI41 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SynbQ8BI41 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
SynbQ8BI41 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.32□□□□□ -0.12
SynbQ8BI41 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SynbQ8BI41 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SynbQ8BI41 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.32□□□□□ -0.12
SynbQ8BI41 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SynbQ8BI41 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SynbQ8BI41 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SynbQ8BI41 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SynbQ8BI41 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SynbQ8BI41 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SynbQ8BI41 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SynbQ8BI41 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SynbQ8BI41 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SynbQ8BI41 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SynbQ8BI41 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SynbQ8BI41 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SynbQ8BI41 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.32□□□□□ -0.12
SynbQ8BI41 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SynbQ8BI41 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SynbQ8BI41 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SynbQ8BI41 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SynbQ8BI41 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SynbQ8BI41 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SynbQ8BI41 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.31□□□□□ -0.12
SynbQ8BI41 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SynbQ8BI41 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SynbQ8BI41 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SynbQ8BI41 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SynbQ8BI41 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SynbQ8BI41 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SynbQ8BI41 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SynbQ8BI41 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SynbQ8BI41 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SynbQ8BI41 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SynbQ8BI41 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SynbQ8BI41 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SynbQ8BI41 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SynbQ8BI41 Gm13616-201ENSMUST00000120600 222 ntBASIC14.31□□□□□ -0.12
SynbQ8BI41 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.31□□□□□ -0.12
SynbQ8BI41 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SynbQ8BI41 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SynbQ8BI41 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.31□□□□□ -0.12
SynbQ8BI41 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SynbQ8BI41 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SynbQ8BI41 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
SynbQ8BI41 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SynbQ8BI41 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SynbQ8BI41 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SynbQ8BI41 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.31□□□□□ -0.12
SynbQ8BI41 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SynbQ8BI41 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SynbQ8BI41 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SynbQ8BI41 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SynbQ8BI41 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
SynbQ8BI41 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SynbQ8BI41 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SynbQ8BI41 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SynbQ8BI41 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.31□□□□□ -0.12
SynbQ8BI41 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.31□□□□□ -0.12
SynbQ8BI41 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SynbQ8BI41 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SynbQ8BI41 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SynbQ8BI41 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.3□□□□□ -0.12
SynbQ8BI41 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SynbQ8BI41 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SynbQ8BI41 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SynbQ8BI41 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SynbQ8BI41 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.3□□□□□ -0.12
SynbQ8BI41 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms