Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ubp1Q811S7 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ubp1Q811S7 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ubp1Q811S7 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ubp1Q811S7 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ubp1Q811S7 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.78□□□□□ -0.04
Ubp1Q811S7 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ubp1Q811S7 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ubp1Q811S7 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ubp1Q811S7 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ubp1Q811S7 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.78□□□□□ -0.04
Ubp1Q811S7 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ubp1Q811S7 Gm11779-201ENSMUST00000118541 368 ntBASIC14.78□□□□□ -0.04
Ubp1Q811S7 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ubp1Q811S7 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ubp1Q811S7 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.78□□□□□ -0.04
Ubp1Q811S7 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ubp1Q811S7 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ubp1Q811S7 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ubp1Q811S7 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ubp1Q811S7 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ubp1Q811S7 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ubp1Q811S7 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Ubp1Q811S7 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ubp1Q811S7 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ubp1Q811S7 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.78□□□□□ -0.04
Ubp1Q811S7 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ubp1Q811S7 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ubp1Q811S7 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ubp1Q811S7 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ubp1Q811S7 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ubp1Q811S7 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ubp1Q811S7 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ubp1Q811S7 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ubp1Q811S7 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
Ubp1Q811S7 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ubp1Q811S7 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ubp1Q811S7 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ubp1Q811S7 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Ubp1Q811S7 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
Ubp1Q811S7 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ubp1Q811S7 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ubp1Q811S7 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.77□□□□□ -0.04
Ubp1Q811S7 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ubp1Q811S7 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ubp1Q811S7 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ubp1Q811S7 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ubp1Q811S7 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ubp1Q811S7 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ubp1Q811S7 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.77□□□□□ -0.04
Ubp1Q811S7 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
Ubp1Q811S7 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ubp1Q811S7 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.77□□□□□ -0.05
Ubp1Q811S7 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.77□□□□□ -0.05
Ubp1Q811S7 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ubp1Q811S7 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ubp1Q811S7 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ubp1Q811S7 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Ubp1Q811S7 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ubp1Q811S7 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Ubp1Q811S7 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ubp1Q811S7 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Ubp1Q811S7 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Ubp1Q811S7 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.77□□□□□ -0.05
Ubp1Q811S7 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ubp1Q811S7 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Ubp1Q811S7 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ubp1Q811S7 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ubp1Q811S7 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ubp1Q811S7 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ubp1Q811S7 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ubp1Q811S7 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.76□□□□□ -0.05
Ubp1Q811S7 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Ubp1Q811S7 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubp1Q811S7 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubp1Q811S7 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.76□□□□□ -0.05
Ubp1Q811S7 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubp1Q811S7 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ubp1Q811S7 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubp1Q811S7 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubp1Q811S7 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Ubp1Q811S7 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubp1Q811S7 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubp1Q811S7 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubp1Q811S7 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubp1Q811S7 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubp1Q811S7 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubp1Q811S7 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubp1Q811S7 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubp1Q811S7 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.76□□□□□ -0.05
Ubp1Q811S7 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Ubp1Q811S7 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.76□□□□□ -0.05
Ubp1Q811S7 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubp1Q811S7 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubp1Q811S7 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubp1Q811S7 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ubp1Q811S7 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubp1Q811S7 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubp1Q811S7 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubp1Q811S7 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms