Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk3bQ80YF6 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk3bQ80YF6 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.68□□□□□ -0.38
Upk3bQ80YF6 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.68□□□□□ -0.38
Upk3bQ80YF6 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Upk3bQ80YF6 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.67□□□□□ -0.38
Upk3bQ80YF6 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Upk3bQ80YF6 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3bQ80YF6 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3bQ80YF6 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3bQ80YF6 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3bQ80YF6 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3bQ80YF6 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3bQ80YF6 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3bQ80YF6 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3bQ80YF6 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3bQ80YF6 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Upk3bQ80YF6 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3bQ80YF6 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Upk3bQ80YF6 Gm12008-201ENSMUST00000117791 755 ntBASIC12.67□□□□□ -0.38
Upk3bQ80YF6 AA414768-201ENSMUST00000121924 1257 ntBASIC12.67□□□□□ -0.38
Upk3bQ80YF6 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.67□□□□□ -0.38
Upk3bQ80YF6 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.67□□□□□ -0.38
Upk3bQ80YF6 Gm23547-201ENSMUST00000158210 271 ntBASIC12.67□□□□□ -0.38
Upk3bQ80YF6 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3bQ80YF6 Gm27742-201ENSMUST00000184667 60 ntBASIC12.67□□□□□ -0.38
Upk3bQ80YF6 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.67□□□□□ -0.38
Upk3bQ80YF6 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.67□□□□□ -0.38
Upk3bQ80YF6 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.67□□□□□ -0.38
Upk3bQ80YF6 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3bQ80YF6 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3bQ80YF6 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.67□□□□□ -0.38
Upk3bQ80YF6 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Upk3bQ80YF6 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3bQ80YF6 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Upk3bQ80YF6 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.67□□□□□ -0.38
Upk3bQ80YF6 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3bQ80YF6 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Upk3bQ80YF6 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3bQ80YF6 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3bQ80YF6 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3bQ80YF6 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3bQ80YF6 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3bQ80YF6 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3bQ80YF6 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Upk3bQ80YF6 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Upk3bQ80YF6 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3bQ80YF6 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3bQ80YF6 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3bQ80YF6 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3bQ80YF6 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3bQ80YF6 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Upk3bQ80YF6 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3bQ80YF6 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Upk3bQ80YF6 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Upk3bQ80YF6 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Upk3bQ80YF6 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Upk3bQ80YF6 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Upk3bQ80YF6 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Upk3bQ80YF6 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Upk3bQ80YF6 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Upk3bQ80YF6 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Upk3bQ80YF6 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Upk3bQ80YF6 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Upk3bQ80YF6 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.66□□□□□ -0.38
Upk3bQ80YF6 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Upk3bQ80YF6 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Upk3bQ80YF6 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Upk3bQ80YF6 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC12.66□□□□□ -0.38
Upk3bQ80YF6 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Upk3bQ80YF6 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC12.66□□□□□ -0.38
Upk3bQ80YF6 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.66□□□□□ -0.38
Upk3bQ80YF6 Gm23634-201ENSMUST00000175071 91 ntBASIC12.66□□□□□ -0.38
Upk3bQ80YF6 Gm7506-201ENSMUST00000207758 815 ntBASIC12.66□□□□□ -0.38
Upk3bQ80YF6 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.66□□□□□ -0.38
Upk3bQ80YF6 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Upk3bQ80YF6 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Upk3bQ80YF6 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.66□□□□□ -0.38
Upk3bQ80YF6 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Upk3bQ80YF6 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Upk3bQ80YF6 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Upk3bQ80YF6 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Upk3bQ80YF6 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Upk3bQ80YF6 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Upk3bQ80YF6 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Upk3bQ80YF6 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Upk3bQ80YF6 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Upk3bQ80YF6 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.66□□□□□ -0.38
Upk3bQ80YF6 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Upk3bQ80YF6 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Upk3bQ80YF6 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Upk3bQ80YF6 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Upk3bQ80YF6 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk3bQ80YF6 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk3bQ80YF6 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Upk3bQ80YF6 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Upk3bQ80YF6 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk3bQ80YF6 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Upk3bQ80YF6 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk3bQ80YF6 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms