Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.67■□□□□ 0.1
Prpf38bQ80SY5 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.67■□□□□ 0.1
Prpf38bQ80SY5 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf38bQ80SY5 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf38bQ80SY5 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf38bQ80SY5 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf38bQ80SY5 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.67■□□□□ 0.1
Prpf38bQ80SY5 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf38bQ80SY5 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Prpf38bQ80SY5 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf38bQ80SY5 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf38bQ80SY5 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf38bQ80SY5 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.67■□□□□ 0.1
Prpf38bQ80SY5 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf38bQ80SY5 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf38bQ80SY5 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf38bQ80SY5 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf38bQ80SY5 App-207ENSMUST00000227737 2827 ntBASIC15.67■□□□□ 0.1
Prpf38bQ80SY5 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf38bQ80SY5 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.66■□□□□ 0.1
Prpf38bQ80SY5 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.66■□□□□ 0.1
Prpf38bQ80SY5 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.66■□□□□ 0.1
Prpf38bQ80SY5 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Prpf38bQ80SY5 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf38bQ80SY5 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf38bQ80SY5 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.66■□□□□ 0.1
Prpf38bQ80SY5 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.66■□□□□ 0.1
Prpf38bQ80SY5 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf38bQ80SY5 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.66■□□□□ 0.1
Prpf38bQ80SY5 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf38bQ80SY5 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Prpf38bQ80SY5 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf38bQ80SY5 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf38bQ80SY5 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Prpf38bQ80SY5 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf38bQ80SY5 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Prpf38bQ80SY5 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf38bQ80SY5 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf38bQ80SY5 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf38bQ80SY5 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf38bQ80SY5 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf38bQ80SY5 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf38bQ80SY5 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf38bQ80SY5 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf38bQ80SY5 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf38bQ80SY5 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.66■□□□□ 0.1
Prpf38bQ80SY5 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Prpf38bQ80SY5 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf38bQ80SY5 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf38bQ80SY5 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf38bQ80SY5 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.65■□□□□ 0.1
Prpf38bQ80SY5 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prpf38bQ80SY5 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Prpf38bQ80SY5 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prpf38bQ80SY5 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Prpf38bQ80SY5 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.65■□□□□ 0.1
Prpf38bQ80SY5 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prpf38bQ80SY5 Gm13323-201ENSMUST00000120245 1151 ntBASIC15.65■□□□□ 0.1
Prpf38bQ80SY5 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.65■□□□□ 0.1
Prpf38bQ80SY5 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Prpf38bQ80SY5 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.65■□□□□ 0.1
Prpf38bQ80SY5 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.65■□□□□ 0.1
Prpf38bQ80SY5 Gm5177-201ENSMUST00000183092 997 ntBASIC15.65■□□□□ 0.1
Prpf38bQ80SY5 Mir8102-201ENSMUST00000184148 139 ntBASIC15.65■□□□□ 0.1
Prpf38bQ80SY5 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC15.65■□□□□ 0.1
Prpf38bQ80SY5 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.65■□□□□ 0.1
Prpf38bQ80SY5 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Prpf38bQ80SY5 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prpf38bQ80SY5 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prpf38bQ80SY5 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prpf38bQ80SY5 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Prpf38bQ80SY5 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Prpf38bQ80SY5 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prpf38bQ80SY5 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Prpf38bQ80SY5 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Prpf38bQ80SY5 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prpf38bQ80SY5 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prpf38bQ80SY5 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prpf38bQ80SY5 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prpf38bQ80SY5 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Prpf38bQ80SY5 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prpf38bQ80SY5 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Prpf38bQ80SY5 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Prpf38bQ80SY5 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Prpf38bQ80SY5 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Prpf38bQ80SY5 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Prpf38bQ80SY5 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Prpf38bQ80SY5 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
Prpf38bQ80SY5 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Prpf38bQ80SY5 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Prpf38bQ80SY5 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Prpf38bQ80SY5 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.64■□□□□ 0.09
Prpf38bQ80SY5 Gm13597-201ENSMUST00000121239 375 ntBASIC15.64■□□□□ 0.09
Prpf38bQ80SY5 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Prpf38bQ80SY5 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.64■□□□□ 0.09
Prpf38bQ80SY5 Gm24158-201ENSMUST00000175263 71 ntBASIC15.64■□□□□ 0.09
Prpf38bQ80SY5 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC15.64■□□□□ 0.09
Prpf38bQ80SY5 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
Prpf38bQ80SY5 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Prpf38bQ80SY5 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms