Protein–RNA interactions for Protein: Q6ZWR6

Syne1, Nesprin-1, mousemouse

Predictions only

Length 8,799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1Q6ZWR6 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 Gm14719-201ENSMUST00000121891 340 ntBASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 Gm6257-201ENSMUST00000163864 910 ntBASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 Gm7901-201ENSMUST00000120430 1597 ntBASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 Arhgef33-209ENSMUST00000225223 714 ntBASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Syne1Q6ZWR6 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Gm17837-201ENSMUST00000186435 985 ntBASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Gm13829-201ENSMUST00000119600 138 ntBASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Syne1Q6ZWR6 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms