Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Dhx40Q6PE54 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Dhx40Q6PE54 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Dhx40Q6PE54 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Dhx40Q6PE54 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Dhx40Q6PE54 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.66■□□□□ 0.26
Dhx40Q6PE54 Gm27646-201ENSMUST00000183989 110 ntBASIC16.66■□□□□ 0.26
Dhx40Q6PE54 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.66■□□□□ 0.26
Dhx40Q6PE54 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.66■□□□□ 0.26
Dhx40Q6PE54 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.66■□□□□ 0.26
Dhx40Q6PE54 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.66■□□□□ 0.26
Dhx40Q6PE54 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Dhx40Q6PE54 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Dhx40Q6PE54 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Dhx40Q6PE54 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Dhx40Q6PE54 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Dhx40Q6PE54 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Dhx40Q6PE54 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Dhx40Q6PE54 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Dhx40Q6PE54 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Dhx40Q6PE54 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Dhx40Q6PE54 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Dhx40Q6PE54 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Dhx40Q6PE54 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.65■□□□□ 0.26
Dhx40Q6PE54 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Dhx40Q6PE54 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Dhx40Q6PE54 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Dhx40Q6PE54 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Dhx40Q6PE54 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Dhx40Q6PE54 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Dhx40Q6PE54 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Dhx40Q6PE54 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Dhx40Q6PE54 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.65■□□□□ 0.26
Dhx40Q6PE54 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC16.65■□□□□ 0.26
Dhx40Q6PE54 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC16.65■□□□□ 0.26
Dhx40Q6PE54 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Dhx40Q6PE54 Gm43767-201ENSMUST00000198933 381 ntBASIC16.65■□□□□ 0.26
Dhx40Q6PE54 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Dhx40Q6PE54 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Dhx40Q6PE54 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Dhx40Q6PE54 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Dhx40Q6PE54 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Dhx40Q6PE54 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Dhx40Q6PE54 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Dhx40Q6PE54 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Dhx40Q6PE54 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
Dhx40Q6PE54 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Dhx40Q6PE54 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.26
Dhx40Q6PE54 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Dhx40Q6PE54 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Dhx40Q6PE54 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Dhx40Q6PE54 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.64■□□□□ 0.25
Dhx40Q6PE54 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Dhx40Q6PE54 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Dhx40Q6PE54 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC16.64■□□□□ 0.25
Dhx40Q6PE54 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Dhx40Q6PE54 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Dhx40Q6PE54 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Dhx40Q6PE54 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Dhx40Q6PE54 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Dhx40Q6PE54 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Dhx40Q6PE54 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Dhx40Q6PE54 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.64■□□□□ 0.25
Dhx40Q6PE54 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Dhx40Q6PE54 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Dhx40Q6PE54 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Dhx40Q6PE54 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Dhx40Q6PE54 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Dhx40Q6PE54 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Dhx40Q6PE54 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Dhx40Q6PE54 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Dhx40Q6PE54 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Dhx40Q6PE54 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Dhx40Q6PE54 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Dhx40Q6PE54 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Dhx40Q6PE54 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.63■□□□□ 0.25
Dhx40Q6PE54 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Dhx40Q6PE54 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Dhx40Q6PE54 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Dhx40Q6PE54 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Dhx40Q6PE54 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Dhx40Q6PE54 Gm12895-201ENSMUST00000122214 226 ntBASIC16.63■□□□□ 0.25
Dhx40Q6PE54 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Dhx40Q6PE54 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.63■□□□□ 0.25
Dhx40Q6PE54 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.63■□□□□ 0.25
Dhx40Q6PE54 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Dhx40Q6PE54 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Dhx40Q6PE54 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Dhx40Q6PE54 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Dhx40Q6PE54 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC16.63■□□□□ 0.25
Dhx40Q6PE54 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Dhx40Q6PE54 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Dhx40Q6PE54 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Dhx40Q6PE54 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Dhx40Q6PE54 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Dhx40Q6PE54 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Dhx40Q6PE54 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
Dhx40Q6PE54 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Dhx40Q6PE54 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Dhx40Q6PE54 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms