Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm8515-201ENSMUST00000194852 576 ntBASIC13.12□□□□□ -0.31
Snrnp40Q6PE01 Gm46209-201ENSMUST00000217912 553 ntBASIC13.12□□□□□ -0.31
Snrnp40Q6PE01 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Snrnp40Q6PE01 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Snrnp40Q6PE01 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Snrnp40Q6PE01 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Snrnp40Q6PE01 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.12□□□□□ -0.31
Snrnp40Q6PE01 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Snrnp40Q6PE01 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Snrnp40Q6PE01 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Snrnp40Q6PE01 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Snrnp40Q6PE01 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Snrnp40Q6PE01 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Snrnp40Q6PE01 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
Snrnp40Q6PE01 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.11□□□□□ -0.31
Snrnp40Q6PE01 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.11□□□□□ -0.31
Snrnp40Q6PE01 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Snrnp40Q6PE01 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Snrnp40Q6PE01 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Snrnp40Q6PE01 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.11□□□□□ -0.31
Snrnp40Q6PE01 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Snrnp40Q6PE01 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Snrnp40Q6PE01 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Snrnp40Q6PE01 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Snrnp40Q6PE01 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Snrnp40Q6PE01 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Snrnp40Q6PE01 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Snrnp40Q6PE01 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Snrnp40Q6PE01 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Snrnp40Q6PE01 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Snrnp40Q6PE01 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Snrnp40Q6PE01 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Snrnp40Q6PE01 Gm4875-201ENSMUST00000118257 786 ntBASIC13.11□□□□□ -0.31
Snrnp40Q6PE01 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Snrnp40Q6PE01 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.11□□□□□ -0.31
Snrnp40Q6PE01 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Snrnp40Q6PE01 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Snrnp40Q6PE01 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.11□□□□□ -0.31
Snrnp40Q6PE01 Gm45384-201ENSMUST00000210451 277 ntBASIC13.11□□□□□ -0.31
Snrnp40Q6PE01 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.11□□□□□ -0.31
Snrnp40Q6PE01 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.11□□□□□ -0.31
Snrnp40Q6PE01 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Snrnp40Q6PE01 Gm20445-201ENSMUST00000061905 565 ntBASIC13.11□□□□□ -0.31
Snrnp40Q6PE01 Gm6180-201ENSMUST00000065243 498 ntBASIC13.11□□□□□ -0.31
Snrnp40Q6PE01 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Snrnp40Q6PE01 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.11□□□□□ -0.31
Snrnp40Q6PE01 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Snrnp40Q6PE01 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Snrnp40Q6PE01 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Snrnp40Q6PE01 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Snrnp40Q6PE01 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Snrnp40Q6PE01 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Snrnp40Q6PE01 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Snrnp40Q6PE01 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Snrnp40Q6PE01 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Snrnp40Q6PE01 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Snrnp40Q6PE01 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Snrnp40Q6PE01 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Snrnp40Q6PE01 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Snrnp40Q6PE01 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Snrnp40Q6PE01 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Snrnp40Q6PE01 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Snrnp40Q6PE01 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Snrnp40Q6PE01 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Snrnp40Q6PE01 Gm11478-201ENSMUST00000117851 599 ntBASIC13.1□□□□□ -0.31
Snrnp40Q6PE01 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.1□□□□□ -0.31
Snrnp40Q6PE01 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.1□□□□□ -0.31
Snrnp40Q6PE01 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.1□□□□□ -0.31
Snrnp40Q6PE01 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Snrnp40Q6PE01 Gm25857-201ENSMUST00000082788 129 ntBASIC13.1□□□□□ -0.31
Snrnp40Q6PE01 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Snrnp40Q6PE01 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.1□□□□□ -0.31
Snrnp40Q6PE01 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.1□□□□□ -0.31
Snrnp40Q6PE01 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Snrnp40Q6PE01 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Snrnp40Q6PE01 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Snrnp40Q6PE01 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.1□□□□□ -0.31
Snrnp40Q6PE01 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Snrnp40Q6PE01 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Snrnp40Q6PE01 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Snrnp40Q6PE01 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Snrnp40Q6PE01 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Snrnp40Q6PE01 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Snrnp40Q6PE01 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Snrnp40Q6PE01 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Snrnp40Q6PE01 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Snrnp40Q6PE01 Gm15653-201ENSMUST00000119247 907 ntBASIC13.09□□□□□ -0.31
Snrnp40Q6PE01 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.09□□□□□ -0.31
Snrnp40Q6PE01 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Snrnp40Q6PE01 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.09□□□□□ -0.31
Snrnp40Q6PE01 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Snrnp40Q6PE01 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Snrnp40Q6PE01 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Snrnp40Q6PE01 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Snrnp40Q6PE01 Gm43703-201ENSMUST00000200523 763 ntBASIC13.09□□□□□ -0.31
Snrnp40Q6PE01 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.09□□□□□ -0.31
Snrnp40Q6PE01 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.09□□□□□ -0.31
Snrnp40Q6PE01 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Snrnp40Q6PE01 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Snrnp40Q6PE01 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms