Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Chd4Q6PDQ2 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Chd4Q6PDQ2 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chd4Q6PDQ2 Gm9182-201ENSMUST00000217829 639 ntBASIC19.31■□□□□ 0.68
Chd4Q6PDQ2 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chd4Q6PDQ2 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chd4Q6PDQ2 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chd4Q6PDQ2 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Chd4Q6PDQ2 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chd4Q6PDQ2 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Chd4Q6PDQ2 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Chd4Q6PDQ2 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Chd4Q6PDQ2 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chd4Q6PDQ2 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chd4Q6PDQ2 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Chd4Q6PDQ2 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chd4Q6PDQ2 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Chd4Q6PDQ2 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Chd4Q6PDQ2 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Chd4Q6PDQ2 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Chd4Q6PDQ2 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC19.3■□□□□ 0.68
Chd4Q6PDQ2 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chd4Q6PDQ2 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chd4Q6PDQ2 Gm16011-201ENSMUST00000121567 2662 ntBASIC19.3■□□□□ 0.68
Chd4Q6PDQ2 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd4Q6PDQ2 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd4Q6PDQ2 Gm8749-201ENSMUST00000117737 331 ntBASIC19.29■□□□□ 0.68
Chd4Q6PDQ2 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC19.29■□□□□ 0.68
Chd4Q6PDQ2 AC159006.1-201ENSMUST00000226396 258 ntBASIC19.29■□□□□ 0.68
Chd4Q6PDQ2 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd4Q6PDQ2 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd4Q6PDQ2 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd4Q6PDQ2 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd4Q6PDQ2 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd4Q6PDQ2 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd4Q6PDQ2 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd4Q6PDQ2 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd4Q6PDQ2 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd4Q6PDQ2 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd4Q6PDQ2 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd4Q6PDQ2 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd4Q6PDQ2 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Chd4Q6PDQ2 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Chd4Q6PDQ2 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd4Q6PDQ2 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd4Q6PDQ2 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC19.29■□□□□ 0.68
Chd4Q6PDQ2 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd4Q6PDQ2 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd4Q6PDQ2 Gm9252-201ENSMUST00000172364 1602 ntBASIC19.29■□□□□ 0.68
Chd4Q6PDQ2 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Chd4Q6PDQ2 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Chd4Q6PDQ2 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chd4Q6PDQ2 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chd4Q6PDQ2 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC19.28■□□□□ 0.68
Chd4Q6PDQ2 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Chd4Q6PDQ2 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Chd4Q6PDQ2 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Chd4Q6PDQ2 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chd4Q6PDQ2 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Chd4Q6PDQ2 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chd4Q6PDQ2 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chd4Q6PDQ2 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC19.28■□□□□ 0.68
Chd4Q6PDQ2 Gm6916-202ENSMUST00000205523 195 ntBASIC19.28■□□□□ 0.68
Chd4Q6PDQ2 Gm45668-201ENSMUST00000211271 493 ntBASIC19.28■□□□□ 0.68
Chd4Q6PDQ2 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC19.28■□□□□ 0.68
Chd4Q6PDQ2 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chd4Q6PDQ2 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chd4Q6PDQ2 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Chd4Q6PDQ2 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Chd4Q6PDQ2 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chd4Q6PDQ2 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chd4Q6PDQ2 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chd4Q6PDQ2 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
Chd4Q6PDQ2 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chd4Q6PDQ2 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chd4Q6PDQ2 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chd4Q6PDQ2 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chd4Q6PDQ2 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chd4Q6PDQ2 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Chd4Q6PDQ2 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chd4Q6PDQ2 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC19.27■□□□□ 0.68
Chd4Q6PDQ2 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Chd4Q6PDQ2 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chd4Q6PDQ2 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chd4Q6PDQ2 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chd4Q6PDQ2 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chd4Q6PDQ2 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chd4Q6PDQ2 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chd4Q6PDQ2 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Chd4Q6PDQ2 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Chd4Q6PDQ2 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chd4Q6PDQ2 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Chd4Q6PDQ2 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC19.27■□□□□ 0.67
Chd4Q6PDQ2 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Chd4Q6PDQ2 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Chd4Q6PDQ2 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC19.27■□□□□ 0.67
Chd4Q6PDQ2 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Chd4Q6PDQ2 AC154239.3-201ENSMUST00000226933 674 ntBASIC19.27■□□□□ 0.67
Chd4Q6PDQ2 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Chd4Q6PDQ2 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms