Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcc2Q6PDG5 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcc2Q6PDG5 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcc2Q6PDG5 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcc2Q6PDG5 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Smarcc2Q6PDG5 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcc2Q6PDG5 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcc2Q6PDG5 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Smarcc2Q6PDG5 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcc2Q6PDG5 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcc2Q6PDG5 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Smarcc2Q6PDG5 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcc2Q6PDG5 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcc2Q6PDG5 Gm37736-201ENSMUST00000193564 2802 ntBASIC17.46■□□□□ 0.39
Smarcc2Q6PDG5 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcc2Q6PDG5 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcc2Q6PDG5 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcc2Q6PDG5 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcc2Q6PDG5 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcc2Q6PDG5 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcc2Q6PDG5 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.46■□□□□ 0.39
Smarcc2Q6PDG5 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcc2Q6PDG5 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcc2Q6PDG5 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcc2Q6PDG5 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcc2Q6PDG5 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcc2Q6PDG5 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Smarcc2Q6PDG5 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcc2Q6PDG5 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcc2Q6PDG5 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcc2Q6PDG5 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Smarcc2Q6PDG5 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcc2Q6PDG5 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcc2Q6PDG5 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcc2Q6PDG5 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcc2Q6PDG5 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcc2Q6PDG5 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcc2Q6PDG5 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Smarcc2Q6PDG5 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Smarcc2Q6PDG5 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.45■□□□□ 0.38
Smarcc2Q6PDG5 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Smarcc2Q6PDG5 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.45■□□□□ 0.38
Smarcc2Q6PDG5 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcc2Q6PDG5 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcc2Q6PDG5 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcc2Q6PDG5 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.45■□□□□ 0.38
Smarcc2Q6PDG5 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcc2Q6PDG5 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcc2Q6PDG5 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcc2Q6PDG5 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Smarcc2Q6PDG5 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcc2Q6PDG5 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcc2Q6PDG5 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcc2Q6PDG5 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcc2Q6PDG5 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcc2Q6PDG5 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcc2Q6PDG5 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcc2Q6PDG5 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcc2Q6PDG5 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcc2Q6PDG5 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
Smarcc2Q6PDG5 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Smarcc2Q6PDG5 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
Smarcc2Q6PDG5 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Smarcc2Q6PDG5 Gm14494-201ENSMUST00000118786 435 ntBASIC17.44■□□□□ 0.38
Smarcc2Q6PDG5 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcc2Q6PDG5 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17.44■□□□□ 0.38
Smarcc2Q6PDG5 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcc2Q6PDG5 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcc2Q6PDG5 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Smarcc2Q6PDG5 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcc2Q6PDG5 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.44■□□□□ 0.38
Smarcc2Q6PDG5 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcc2Q6PDG5 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcc2Q6PDG5 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcc2Q6PDG5 AC119177.1-201ENSMUST00000227647 1332 ntBASIC17.44■□□□□ 0.38
Smarcc2Q6PDG5 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcc2Q6PDG5 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcc2Q6PDG5 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcc2Q6PDG5 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcc2Q6PDG5 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcc2Q6PDG5 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Smarcc2Q6PDG5 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcc2Q6PDG5 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcc2Q6PDG5 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcc2Q6PDG5 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcc2Q6PDG5 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcc2Q6PDG5 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.43■□□□□ 0.38
Smarcc2Q6PDG5 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcc2Q6PDG5 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcc2Q6PDG5 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.43■□□□□ 0.38
Smarcc2Q6PDG5 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcc2Q6PDG5 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcc2Q6PDG5 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcc2Q6PDG5 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.43■□□□□ 0.38
Smarcc2Q6PDG5 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcc2Q6PDG5 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcc2Q6PDG5 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.43■□□□□ 0.38
Smarcc2Q6PDG5 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcc2Q6PDG5 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcc2Q6PDG5 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms