Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Gm15358-201ENSMUST00000119249 520 ntBASIC13.77□□□□□ -0.21
Smarcd3Q6P9Z1 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcd3Q6P9Z1 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcd3Q6P9Z1 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcd3Q6P9Z1 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcd3Q6P9Z1 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.77□□□□□ -0.21
Smarcd3Q6P9Z1 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcd3Q6P9Z1 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcd3Q6P9Z1 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Smarcd3Q6P9Z1 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcd3Q6P9Z1 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.77□□□□□ -0.21
Smarcd3Q6P9Z1 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.77□□□□□ -0.21
Smarcd3Q6P9Z1 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcd3Q6P9Z1 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcd3Q6P9Z1 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcd3Q6P9Z1 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcd3Q6P9Z1 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcd3Q6P9Z1 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcd3Q6P9Z1 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcd3Q6P9Z1 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcd3Q6P9Z1 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcd3Q6P9Z1 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcd3Q6P9Z1 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Smarcd3Q6P9Z1 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcd3Q6P9Z1 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcd3Q6P9Z1 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.77□□□□□ -0.21
Smarcd3Q6P9Z1 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcd3Q6P9Z1 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Smarcd3Q6P9Z1 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcd3Q6P9Z1 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd3Q6P9Z1 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd3Q6P9Z1 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd3Q6P9Z1 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd3Q6P9Z1 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd3Q6P9Z1 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd3Q6P9Z1 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd3Q6P9Z1 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd3Q6P9Z1 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.76□□□□□ -0.21
Smarcd3Q6P9Z1 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd3Q6P9Z1 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Smarcd3Q6P9Z1 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.76□□□□□ -0.21
Smarcd3Q6P9Z1 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd3Q6P9Z1 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd3Q6P9Z1 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC13.76□□□□□ -0.21
Smarcd3Q6P9Z1 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Smarcd3Q6P9Z1 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd3Q6P9Z1 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Smarcd3Q6P9Z1 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd3Q6P9Z1 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd3Q6P9Z1 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd3Q6P9Z1 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd3Q6P9Z1 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd3Q6P9Z1 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd3Q6P9Z1 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd3Q6P9Z1 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Smarcd3Q6P9Z1 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Smarcd3Q6P9Z1 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd3Q6P9Z1 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd3Q6P9Z1 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd3Q6P9Z1 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd3Q6P9Z1 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd3Q6P9Z1 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd3Q6P9Z1 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd3Q6P9Z1 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd3Q6P9Z1 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Smarcd3Q6P9Z1 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Smarcd3Q6P9Z1 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd3Q6P9Z1 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd3Q6P9Z1 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd3Q6P9Z1 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.75□□□□□ -0.21
Smarcd3Q6P9Z1 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd3Q6P9Z1 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd3Q6P9Z1 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
Smarcd3Q6P9Z1 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd3Q6P9Z1 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd3Q6P9Z1 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.75□□□□□ -0.21
Smarcd3Q6P9Z1 Gm8097-201ENSMUST00000117903 829 ntBASIC13.75□□□□□ -0.21
Smarcd3Q6P9Z1 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.75□□□□□ -0.21
Smarcd3Q6P9Z1 Gm8318-201ENSMUST00000182954 872 ntBASIC13.75□□□□□ -0.21
Smarcd3Q6P9Z1 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd3Q6P9Z1 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.75□□□□□ -0.21
Smarcd3Q6P9Z1 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd3Q6P9Z1 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd3Q6P9Z1 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd3Q6P9Z1 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd3Q6P9Z1 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Smarcd3Q6P9Z1 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd3Q6P9Z1 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd3Q6P9Z1 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd3Q6P9Z1 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd3Q6P9Z1 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd3Q6P9Z1 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd3Q6P9Z1 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd3Q6P9Z1 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd3Q6P9Z1 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd3Q6P9Z1 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd3Q6P9Z1 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Smarcd3Q6P9Z1 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Smarcd3Q6P9Z1 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd3Q6P9Z1 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms