Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgb4Q6P8W9 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgb4Q6P8W9 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgb4Q6P8W9 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Hmgb4Q6P8W9 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgb4Q6P8W9 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgb4Q6P8W9 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgb4Q6P8W9 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgb4Q6P8W9 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.7■□□□□ 0.1
Hmgb4Q6P8W9 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Hmgb4Q6P8W9 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgb4Q6P8W9 Gm8318-201ENSMUST00000182954 872 ntBASIC15.7■□□□□ 0.1
Hmgb4Q6P8W9 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.7■□□□□ 0.1
Hmgb4Q6P8W9 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgb4Q6P8W9 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.7■□□□□ 0.1
Hmgb4Q6P8W9 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgb4Q6P8W9 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgb4Q6P8W9 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgb4Q6P8W9 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Hmgb4Q6P8W9 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Hmgb4Q6P8W9 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Hmgb4Q6P8W9 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.7■□□□□ 0.1
Hmgb4Q6P8W9 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgb4Q6P8W9 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgb4Q6P8W9 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgb4Q6P8W9 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.7■□□□□ 0.1
Hmgb4Q6P8W9 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hmgb4Q6P8W9 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hmgb4Q6P8W9 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Hmgb4Q6P8W9 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hmgb4Q6P8W9 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.69■□□□□ 0.1
Hmgb4Q6P8W9 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.69■□□□□ 0.1
Hmgb4Q6P8W9 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hmgb4Q6P8W9 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.69■□□□□ 0.1
Hmgb4Q6P8W9 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.69■□□□□ 0.1
Hmgb4Q6P8W9 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Hmgb4Q6P8W9 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Hmgb4Q6P8W9 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Hmgb4Q6P8W9 Gm10499-201ENSMUST00000174094 934 ntBASIC15.69■□□□□ 0.1
Hmgb4Q6P8W9 Mir6956-201ENSMUST00000183598 62 ntBASIC15.69■□□□□ 0.1
Hmgb4Q6P8W9 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hmgb4Q6P8W9 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Hmgb4Q6P8W9 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.69■□□□□ 0.1
Hmgb4Q6P8W9 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hmgb4Q6P8W9 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hmgb4Q6P8W9 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.69■□□□□ 0.1
Hmgb4Q6P8W9 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.69■□□□□ 0.1
Hmgb4Q6P8W9 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hmgb4Q6P8W9 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Hmgb4Q6P8W9 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hmgb4Q6P8W9 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hmgb4Q6P8W9 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hmgb4Q6P8W9 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hmgb4Q6P8W9 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hmgb4Q6P8W9 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hmgb4Q6P8W9 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.68■□□□□ 0.1
Hmgb4Q6P8W9 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.68■□□□□ 0.1
Hmgb4Q6P8W9 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hmgb4Q6P8W9 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hmgb4Q6P8W9 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.68■□□□□ 0.1
Hmgb4Q6P8W9 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hmgb4Q6P8W9 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hmgb4Q6P8W9 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hmgb4Q6P8W9 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hmgb4Q6P8W9 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.68■□□□□ 0.1
Hmgb4Q6P8W9 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hmgb4Q6P8W9 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.68■□□□□ 0.1
Hmgb4Q6P8W9 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hmgb4Q6P8W9 Gm37171-201ENSMUST00000192636 1185 ntBASIC15.68■□□□□ 0.1
Hmgb4Q6P8W9 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.68■□□□□ 0.1
Hmgb4Q6P8W9 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.68■□□□□ 0.1
Hmgb4Q6P8W9 AC159114.1-201ENSMUST00000220349 266 ntBASIC15.68■□□□□ 0.1
Hmgb4Q6P8W9 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hmgb4Q6P8W9 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hmgb4Q6P8W9 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hmgb4Q6P8W9 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hmgb4Q6P8W9 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hmgb4Q6P8W9 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Hmgb4Q6P8W9 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hmgb4Q6P8W9 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Hmgb4Q6P8W9 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.68■□□□□ 0.1
Hmgb4Q6P8W9 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hmgb4Q6P8W9 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hmgb4Q6P8W9 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hmgb4Q6P8W9 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.68■□□□□ 0.1
Hmgb4Q6P8W9 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Hmgb4Q6P8W9 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Hmgb4Q6P8W9 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hmgb4Q6P8W9 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hmgb4Q6P8W9 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Hmgb4Q6P8W9 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hmgb4Q6P8W9 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Hmgb4Q6P8W9 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hmgb4Q6P8W9 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hmgb4Q6P8W9 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hmgb4Q6P8W9 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hmgb4Q6P8W9 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hmgb4Q6P8W9 Gm9385-201ENSMUST00000117563 472 ntBASIC15.67■□□□□ 0.1
Hmgb4Q6P8W9 Gm12008-201ENSMUST00000117791 755 ntBASIC15.67■□□□□ 0.1
Hmgb4Q6P8W9 Gm13616-201ENSMUST00000120600 222 ntBASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 100.7 ms